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Merge pull request #46 from openMetadataInitiative/lzehl_missingWHSSD…
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…PEVS

adding missing WHSSDatlas PEVs (migration from SANDS)
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@UlrikeS91
UlrikeS91 authored Apr 19, 2024
2 parents 616ce07 + 00e2ccf commit 79b0acf
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58 changes: 58 additions & 0 deletions ...arcellationEntityVersions/WHSSDatlas_v1.01/WHSSDatlas_v1.01_alveusOfTheHippocampus.jsonld
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{
"@context": {
"@vocab": "https://openminds.ebrains.eu/vocab/"
},
"@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v1.01_alveusOfTheHippocampus",
"@type": "https://openminds.ebrains.eu/sands/ParcellationEntityVersion",
"abbreviation": null,
"additionalRemarks": null,
"alternateName": [
"alv"
],
"correctedName": null,
"hasAnnotation": [
{
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"criteriaQualityType": {
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},
"criteriaType": {
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},
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"internalIdentifier": "6",
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{
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],
"preferredVisualization": {
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"additionalRemarks": null,
"anchorPoint": null,
"cameraPosition": null,
"preferredDisplayColor": {
"@id": "https://openminds.ebrains.eu/instances/singleColor/#FF00FF"
}
},
"specification": null,
"type": null
}
],
"hasParent": [
{
"@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_hippocampalWhiteMatter"
}
],
"lookupLabel": "WHSSDatlas_v1.01_alveusOfTheHippocampus",
"name": "alveus of the hippocampus",
"ontologyIdentifier": null,
"relationAssessment": null,
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}
59 changes: 59 additions & 0 deletions ...ionEntityVersions/WHSSDatlas_v1.01/WHSSDatlas_v1.01_anteriorCommissureAnteriorPart.jsonld
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{
"@context": {
"@vocab": "https://openminds.ebrains.eu/vocab/"
},
"@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v1.01_anteriorCommissureAnteriorPart",
"@type": "https://openminds.ebrains.eu/sands/ParcellationEntityVersion",
"abbreviation": null,
"additionalRemarks": null,
"alternateName": [
"aca",
"anterior commissure, anterior limb"
],
"correctedName": null,
"hasAnnotation": [
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"internalIdentifier": "36",
"laterality": [
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},
{
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],
"preferredVisualization": {
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"additionalRemarks": null,
"anchorPoint": null,
"cameraPosition": null,
"preferredDisplayColor": {
"@id": "https://openminds.ebrains.eu/instances/singleColor/#7CFC00"
}
},
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"type": null
}
],
"hasParent": [
{
"@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_anteriorCommissure"
}
],
"lookupLabel": "WHSSDatlas_v1.01_anteriorCommissureAnteriorPart",
"name": "anterior commissure, anterior part",
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}
58 changes: 58 additions & 0 deletions ...EntityVersions/WHSSDatlas_v1.01/WHSSDatlas_v1.01_anteriorCommissureIntrabulbarPart.jsonld
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{
"@context": {
"@vocab": "https://openminds.ebrains.eu/vocab/"
},
"@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v1.01_anteriorCommissureIntrabulbarPart",
"@type": "https://openminds.ebrains.eu/sands/ParcellationEntityVersion",
"abbreviation": null,
"additionalRemarks": null,
"alternateName": [
"aci"
],
"correctedName": null,
"hasAnnotation": [
{
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"anchorPoint": null,
"criteria": null,
"criteriaQualityType": {
"@id": "https://openminds.ebrains.eu/instances/criteriaQualityType/processive"
},
"criteriaType": {
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},
"inspiredBy": null,
"internalIdentifier": "73",
"laterality": [
{
"@id": "https://openminds.ebrains.eu/instances/laterality/left"
},
{
"@id": "https://openminds.ebrains.eu/instances/laterality/right"
}
],
"preferredVisualization": {
"@type": "https://openminds.ebrains.eu/sands/ViewerSpecification",
"additionalRemarks": null,
"anchorPoint": null,
"cameraPosition": null,
"preferredDisplayColor": {
"@id": "https://openminds.ebrains.eu/instances/singleColor/#FF4FCE"
}
},
"specification": null,
"type": null
}
],
"hasParent": [
{
"@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_anteriorCommissure"
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],
"lookupLabel": "WHSSDatlas_v1.01_anteriorCommissureIntrabulbarPart",
"name": "anterior commissure, intrabulbar part",
"ontologyIdentifier": null,
"relationAssessment": null,
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"versionInnovation": null
}
59 changes: 59 additions & 0 deletions ...onEntityVersions/WHSSDatlas_v1.01/WHSSDatlas_v1.01_anteriorCommissurePosteriorPart.jsonld
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{
"@context": {
"@vocab": "https://openminds.ebrains.eu/vocab/"
},
"@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v1.01_anteriorCommissurePosteriorPart",
"@type": "https://openminds.ebrains.eu/sands/ParcellationEntityVersion",
"abbreviation": null,
"additionalRemarks": null,
"alternateName": [
"acp",
"anterior commissure, posterior limb"
],
"correctedName": null,
"hasAnnotation": [
{
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"anchorPoint": null,
"criteria": null,
"criteriaQualityType": {
"@id": "https://openminds.ebrains.eu/instances/criteriaQualityType/processive"
},
"criteriaType": {
"@id": "https://openminds.ebrains.eu/instances/annotationCriteriaType/deterministicAnnotation"
},
"inspiredBy": null,
"internalIdentifier": "37",
"laterality": [
{
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},
{
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}
],
"preferredVisualization": {
"@type": "https://openminds.ebrains.eu/sands/ViewerSpecification",
"additionalRemarks": null,
"anchorPoint": null,
"cameraPosition": null,
"preferredDisplayColor": {
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}
},
"specification": null,
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}
],
"hasParent": [
{
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}
],
"lookupLabel": "WHSSDatlas_v1.01_anteriorCommissurePosteriorPart",
"name": "anterior commissure, posterior part",
"ontologyIdentifier": null,
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"versionIdentifier": "v1.01",
"versionInnovation": null
}
58 changes: 58 additions & 0 deletions ...onEntityVersions/WHSSDatlas_v1.01/WHSSDatlas_v1.01_ascendingFibersOfTheFacialNerve.jsonld
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{
"@context": {
"@vocab": "https://openminds.ebrains.eu/vocab/"
},
"@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v1.01_ascendingFibersOfTheFacialNerve",
"@type": "https://openminds.ebrains.eu/sands/ParcellationEntityVersion",
"abbreviation": null,
"additionalRemarks": null,
"alternateName": [
"asc7"
],
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"hasAnnotation": [
{
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},
"criteriaType": {
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},
"inspiredBy": null,
"internalIdentifier": "72",
"laterality": [
{
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},
{
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}
],
"preferredVisualization": {
"@type": "https://openminds.ebrains.eu/sands/ViewerSpecification",
"additionalRemarks": null,
"anchorPoint": null,
"cameraPosition": null,
"preferredDisplayColor": {
"@id": "https://openminds.ebrains.eu/instances/singleColor/#B31C35"
}
},
"specification": null,
"type": null
}
],
"hasParent": [
{
"@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_facialNerve"
}
],
"lookupLabel": "WHSSDatlas_v1.01_ascendingFibersOfTheFacialNerve",
"name": "ascending fibers of the facial nerve",
"ontologyIdentifier": null,
"relationAssessment": null,
"versionIdentifier": "v1.01",
"versionInnovation": null
}
58 changes: 58 additions & 0 deletions .../parcellationEntityVersions/WHSSDatlas_v1.01/WHSSDatlas_v1.01_basalForebrainRegion.jsonld
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{
"@context": {
"@vocab": "https://openminds.ebrains.eu/vocab/"
},
"@id": "https://openminds.ebrains.eu/instances/parcellationEntityVersion/WHSSDatlas_v1.01_basalForebrainRegion",
"@type": "https://openminds.ebrains.eu/sands/ParcellationEntityVersion",
"abbreviation": null,
"additionalRemarks": "both .label file name and .mbat file name are \"basal forebrain region\", which is an error; abbreviation for the corrected name has been added under \"alternateName\"; for details, see atlas documentation",
"alternateName": [
"BFR-u"
],
"correctedName": "basal forebrain region, unspecified",
"hasAnnotation": [
{
"@type": "https://openminds.ebrains.eu/sands/AtlasAnnotation",
"anchorPoint": null,
"criteria": null,
"criteriaQualityType": {
"@id": "https://openminds.ebrains.eu/instances/criteriaQualityType/processive"
},
"criteriaType": {
"@id": "https://openminds.ebrains.eu/instances/annotationCriteriaType/deterministicAnnotation"
},
"inspiredBy": null,
"internalIdentifier": "82",
"laterality": [
{
"@id": "https://openminds.ebrains.eu/instances/laterality/left"
},
{
"@id": "https://openminds.ebrains.eu/instances/laterality/right"
}
],
"preferredVisualization": {
"@type": "https://openminds.ebrains.eu/sands/ViewerSpecification",
"additionalRemarks": null,
"anchorPoint": null,
"cameraPosition": null,
"preferredDisplayColor": {
"@id": "https://openminds.ebrains.eu/instances/singleColor/#E1F00D"
}
},
"specification": null,
"type": null
}
],
"hasParent": [
{
"@id": "https://openminds.ebrains.eu/instances/parcellationEntity/WHSSDatlas_grayMatter"
}
],
"lookupLabel": "WHSSDatlas_v1.01_basalForebrainRegion",
"name": "basal forebrain region",
"ontologyIdentifier": null,
"relationAssessment": null,
"versionIdentifier": "v1.01",
"versionInnovation": null
}
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