An Immunophenotypic and Transcriptomic Human Bone Marrow Atlas
This repository documents source-code, scripts and dependent parameter files for the creation of a CITE-Seq and Infinity Flow molecular and cellular atlas of bone marrow.
Dependencies: Python version 3.7 and R version 4.0.2 individual library dependencies are indicated in each module. See associated documentation for each imported library (e.g., scTriangulate, cyCombine, pyInfinityFlow).
Code may require modification to run on other systems, including the change of default parameters.