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Review of #164 - #165

Merged

ivan-aksamentov merged 15 commits into

refactor/reconsensus-updatedfrom

review/reconsensus-updated

Aug 4, 2025

Merged

Review of #164#165
ivan-aksamentov merged 15 commits into
refactor/reconsensus-updatedfrom
review/reconsensus-updated

Commits on Jul 31, 2025
- test: add unit tests for majority edits in PangraphBlock
  mmolari
  committed
  aa1e4b1
Commits on Aug 1, 2025
- refactor: update BlockAnalysis to avoid recomputing edits
  mmolari
  committed
  76f834b
- feat: add block method to change consensus nucleotide and update alignments
  mmolari
  committed
  b610bad
Commits on Aug 2, 2025
- test: add unit tests for is_position_deleted
  mmolari
  committed
  0f8496d
- fix: correct apply_full_reconsensus function logic and change names
  mmolari
  committed
  dd9abae
Commits on Aug 3, 2025
- feat: move consensus update to block method edit_consensus_and_realign
  mmolari
  committed
  c96826b
- docs: improve reconsensus.rs inline comments
  mmolari
  committed
  267f5b7
- docs: inline comments in pangraph_block.rs
  mmolari
  committed
  493a7fe
- test: add unit test for reverse_complement method in PangraphBlock
  mmolari
  committed
  9473045
- feat: sort reverse complement results for subs, dels, and inss in Edit struct
  mmolari
  committed
  8064456
- test: add unit tests for `reconcile_substitution_with_consensus`
  mmolari
  committed
  86ad1bc
- test: add unit test for `edit_consensus_and_realign`
  mmolari
  committed
  ca15a1d
- test: reconsensus unit tests update
  mmolari
  committed
  fbe9c0d
- test: reconsensus unit test update
  mmolari
  committed
  1087faa
Commits on Aug 4, 2025
- refactor: update change_consensus_nucleotide_at_pos to accept Sub
  mmolari
  committed
  0b170e2