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| .DS_Store | ||
| .classpath | ||
| .project | ||
| .settings | ||
| target |
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| Manifest-Version: 1.0 | ||
| Class-Path: | ||
|
|
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| <?xml version="1.0" encoding="UTF-8"?> | ||
| <web-app xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://java.sun.com/xml/ns/javaee" xsi:schemaLocation="http://java.sun.com/xml/ns/javaee http://java.sun.com/xml/ns/javaee/web-app_3_0.xsd" id="WebApp_ID" version="3.0"> | ||
| <display-name>factoid-to-biopax-server</display-name> | ||
| <welcome-file-list> | ||
| <welcome-file>index.html</welcome-file> | ||
| <welcome-file>index.htm</welcome-file> | ||
| <welcome-file>index.jsp</welcome-file> | ||
| <welcome-file>default.html</welcome-file> | ||
| <welcome-file>default.htm</welcome-file> | ||
| <welcome-file>default.jsp</welcome-file> | ||
| </welcome-file-list> | ||
| </web-app> |
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| <project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd"> | ||
| <modelVersion>4.0.0</modelVersion> | ||
| <groupId>factoid-to-biopax-server</groupId> | ||
| <artifactId>factoid-to-biopax-server</artifactId> | ||
| <version>0.0.1-SNAPSHOT</version> | ||
| <packaging>war</packaging> | ||
| <properties> | ||
| <tomcat.server.name>TomcatServer</tomcat.server.name> | ||
| </properties> | ||
| <build> | ||
| <sourceDirectory>src/main/java</sourceDirectory> | ||
| <plugins> | ||
| <plugin> | ||
| <artifactId>maven-compiler-plugin</artifactId> | ||
| <version>3.7.0</version> | ||
| <configuration> | ||
| <source>1.8</source> | ||
| <target>1.8</target> | ||
| </configuration> | ||
| </plugin> | ||
| <plugin> | ||
| <artifactId>maven-war-plugin</artifactId> | ||
| <version>3.0.0</version> | ||
| <configuration> | ||
| <warSourceDirectory>WebContent</warSourceDirectory> | ||
| </configuration> | ||
| </plugin> | ||
| <plugin> | ||
| <groupId>org.apache.tomcat.maven</groupId> | ||
| <artifactId>tomcat7-maven-plugin</artifactId> | ||
| <version>2.2</version> | ||
| <configuration> | ||
| <url>http://localhost:8080/manager/text</url> | ||
| <server>${tomcat.server.name}</server> | ||
| <path>/FactoidToBiopaxServer</path> | ||
| </configuration> | ||
| </plugin> | ||
| </plugins> | ||
| </build> | ||
| <dependencies> | ||
| <!-- https://mvnrepository.com/artifact/org.biopax.paxtools/paxtools-core --> | ||
| <dependency> | ||
| <groupId>org.biopax.paxtools</groupId> | ||
| <artifactId>paxtools-core</artifactId> | ||
| <version>5.0.1</version> | ||
| </dependency> | ||
|
|
||
| <!-- https://mvnrepository.com/artifact/org.apache.commons/commons-collections4 --> | ||
| <dependency> | ||
| <groupId>org.apache.commons</groupId> | ||
| <artifactId>commons-collections4</artifactId> | ||
| <version>4.1</version> | ||
| </dependency> | ||
| <!-- https://mvnrepository.com/artifact/org.apache.commons/commons-lang3 --> | ||
| <!--TODO: check for version--> | ||
| <dependency> | ||
| <groupId>org.apache.commons</groupId> | ||
| <artifactId>commons-lang3</artifactId> | ||
| <version>3.7</version> | ||
| </dependency> | ||
|
|
||
| <!-- https://mvnrepository.com/artifact/com.google.guava/guava --> | ||
| <dependency> | ||
| <groupId>com.google.guava</groupId> | ||
| <artifactId>guava</artifactId> | ||
| <version>24.1-jre</version> | ||
| </dependency> | ||
| <dependency> | ||
| <groupId>org.slf4j</groupId> | ||
| <artifactId>slf4j-api</artifactId> | ||
| <version>1.7.25</version> | ||
| </dependency> | ||
| <!-- https://mvnrepository.com/artifact/com.google.code.gson/gson --> | ||
| <dependency> | ||
| <groupId>com.google.code.gson</groupId> | ||
| <artifactId>gson</artifactId> | ||
| <version>2.8.2</version> | ||
| </dependency> | ||
| <!-- https://mvnrepository.com/artifact/junit/junit --> | ||
| <dependency> | ||
| <groupId>junit</groupId> | ||
| <artifactId>junit</artifactId> | ||
| <version>4.12</version> | ||
| <scope>test</scope> | ||
| </dependency> | ||
| <!-- https://mvnrepository.com/artifact/javax.servlet/servlet-api --> | ||
| <dependency> | ||
| <groupId>javax.servlet</groupId> | ||
| <artifactId>javax.servlet-api</artifactId> | ||
| <version>3.1.0</version> | ||
| </dependency> | ||
| </dependencies> | ||
| </project> |
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