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Release_2.3.0
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@katsikora katsikora released this 07 Oct 13:04
· 1067 commits to master since this release
2.3.0
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Learn about vigilant mode.

snakePipes 2.3.0

  • Deprecated mode Gruen in scRNAseq.
  • scRNAseq mode Alevin now outputs spliced/unspliced counts for RNA velocity estimation based on Soneson et al. 2020, bioRxiv https://doi.org/10.1101/2020.03.13.990069 .
  • Fixed "external_gene_name" and "Status" columns in DESeq2 html report.
  • Removed warning when sample names start with a number.
  • Fixed filtering of empty drops in scRNAseq mode STARsolo.
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