api: keep formulae.json in repo

.gitattributes

@@ -0,0 +1 @@
+*.json.gz filter=lfs diff=lfs merge=lfs -text

.gitignore

@@ -28,5 +28,4 @@ mpcontribs-api/mpcontribs/api/swagger/
 .jupyter/
 .local/
 mpcontribs-portal/mpcontribs/portal/templates/notebooks
-formulae.json
 coverage.xml

cloudformation/pipeline.yml

@@ -82,10 +82,6 @@ Parameters:
     Type: String
   SnsAdminTopicArn:
     Type: String
-  MapiKey:
-    NoEcho: 'true'
-    Type: String
-    Description: API key for MPRester to build formulae lookup table
   DdApiKey:
     NoEcho: 'true'
     Type: String
@@ -427,7 +423,7 @@ Resources:
             build:
               commands:
                 - docker build --tag "${IMAGE_URI}-portal" mpcontribs-portal
-                - docker build --tag "${IMAGE_URI}-api" --build-arg MAPI_KEY=${MAPI_KEY} mpcontribs-api
+                - docker build --tag "${IMAGE_URI}-api" mpcontribs-api
                 - docker build --tag "${IMAGE_URI}-gateway" mpcontribs-sidecars/kernel_gateway
                 - docker build --tag "${IMAGE_URI}-orca" mpcontribs-sidecars/orca
                 - docker build --tag "${IMAGE_URI}-datadog" mpcontribs-sidecars/datadog-agent
@@ -454,8 +450,6 @@ Resources:
             Value: !Sub ${Repository}
           - Name: PREFIX
             Value: !Sub ${PipelineName}-${EnvironmentName}
-          - Name: MAPI_KEY
-            Value: !Ref 'MapiKey'
       Cache:
         Type: LOCAL
         Modes: # You can specify one or more cache mode,

mpcontribs-api/Dockerfile

@@ -15,11 +15,6 @@ RUN pip install $PIP_FLAGS -e .
 #RUN cd flask-mongorest && pip install $PIP_FLAGS -e .
 #RUN cd flasgger && pip install $PIP_FLAGS -e .
 
-ARG MAPI_KEY
-RUN if [ ! -e /app/mpcontribs/api/contributions/formulae.json ]; then \
-        python /app/mpcontribs/api/contributions/generate_formulae.py 2>&1; \
-    fi
-
 FROM base
 COPY --from=builder /root/.local/lib/python3.8/site-packages /root/.local/lib/python3.8/site-packages
 COPY --from=builder /root/.local/bin /root/.local/bin

mpcontribs-api/mpcontribs/api/config.py

@@ -4,10 +4,13 @@
 import os
 import datetime
 import json
+import gzip
 
-with open(
-    os.path.join(os.path.dirname(__file__), "contributions", "formulae.json")
-) as f:
+formulae_path = os.path.join(
+    os.path.dirname(__file__), "contributions", "formulae.json.gz"
+)
+
+with gzip.open(formulae_path) as f:
     FORMULAE = json.load(f)
 
 DEBUG = bool(os.environ.get("FLASK_ENV") == "development")