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Compressing UCSC GENCODEv35 CAT/Liftoff v2 annotation

Status: Open.

#104 In marbl/CHM13;

· Shians opened on May 1, 2025

Processing steps of chain files

Status: Open.

#103 In marbl/CHM13;

· QichenFU opened on Apr 25, 2025

Chromosome sizes for epigenetics files differ from CHM13_v2.0 or are unavailable

Status: Open.

#102 In marbl/CHM13;

· chrarnold opened on Jan 27, 2025

Eu- and heterochromatin

Status: Open.

#101 In marbl/CHM13;

· chrarnold opened on Jan 26, 2025

Questions about the source of T2T-CHM13 genetic map

Status: Open.

#96 In marbl/CHM13;

· lsaeric opened on Apr 25, 2024

Problems in chm13v2.0_RefSeq_Liftoff_v5.1.gff3

Status: Open.

#95 In marbl/CHM13;

· yeeus opened on Apr 20, 2024

Decoy Sequences

Status: Open.

#94 In marbl/CHM13;

· DrinnanSante opened on Mar 21, 2024

Missing parent gene entry for EPHA2

Status: Open.

#92 In marbl/CHM13;

· CodeCheong opened on Nov 20, 2023

mitochondrial genes

Status: Open.

#88 In marbl/CHM13;

· kenneditodd opened on Aug 18, 2023

pseudohomologous regions

Status: Open.

#86 In marbl/CHM13;

· ekg opened on Jul 31, 2023

Issue with preparing TxDB and GRanges object from GFF file

Status: Open.

#85 In marbl/CHM13;

· benjytan88 opened on Jul 14, 2023

Short read alignment to the genome

Status: Open.

#84 In marbl/CHM13;

· CodeCheong opened on Jun 12, 2023