GitHub - liyichiabc163/estim_ID

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Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
BIC_distribution_withinlogL_0829for_auto.m		BIC_distribution_withinlogL_0829for_auto.m
China_subnational_Shenzhen_GD_mcmc_res_.csv		China_subnational_Shenzhen_GD_mcmc_res_.csv
China_subnational_Shenzhen_GD_mcmc_res_dh.csv		China_subnational_Shenzhen_GD_mcmc_res_dh.csv
China_subnational_Shenzhen_GD_mcmc_res_fc.csv		China_subnational_Shenzhen_GD_mcmc_res_fc.csv
Iteration_pdf_cdf_prec_0414_logn_newdata_0514_95CrI_faste_0627.m		Iteration_pdf_cdf_prec_0414_logn_newdata_0514_95CrI_faste_0627.m
LICENSE		LICENSE
README.txt		README.txt
SEIR_memory.m		SEIR_memory.m
Traversal_runMCMC_ACF_Traceplots_etc_____all_params0526.m		Traversal_runMCMC_ACF_Traceplots_etc_____all_params0526.m
acf_0409.m		acf_0409.m
calcMCMCTotalLogLikelihood.m		calcMCMCTotalLogLikelihood.m
calcTotalPopulationArrOneYear.m		calcTotalPopulationArrOneYear.m
calculate_ICs_0509_easiest.m		calculate_ICs_0509_easiest.m
desktop.ini		desktop.ini
findAgeGroupSmallInterv.m		findAgeGroupSmallInterv.m
gampara.m		gampara.m
main.m		main.m
main_plot_result_4figs_best_1231.m		main_plot_result_4figs_best_1231.m
mcmcParallel.m		mcmcParallel.m
mcmcProposal.m		mcmcProposal.m
negTotalLogLikelihood.m		negTotalLogLikelihood.m
only_auto_plots_results_figs_tables_showfigs1231 - pSZH_dhfor.m		only_auto_plots_results_figs_tables_showfigs1231 - pSZH_dhfor.m
only_auto_plots_results_figs_tables_showfigs1231.m		only_auto_plots_results_figs_tables_showfigs1231.m
polymodContactMatrix.m		polymodContactMatrix.m
posterior_distributions.m		posterior_distributions.m
take_posterior_mean_95CrI_values_0514 0604.csv		take_posterior_mean_95CrI_values_0514 0604.csv
take_posterior_mean_95CrI_values_0624basecase.csv		take_posterior_mean_95CrI_values_0624basecase.csv
take_posterior_mean_95CrI_values_0624basecase.m		take_posterior_mean_95CrI_values_0624basecase.m
take_posterior_mean_95CrI_values_0624basecase_6phosp.csv		take_posterior_mean_95CrI_values_0624basecase_6phosp.csv
take_posterior_mean_95CrI_values_data_visualize_0610.csv		take_posterior_mean_95CrI_values_data_visualize_0610.csv
take_posterior_mean_95CrI_values_data_visualize_0624basecase.m		take_posterior_mean_95CrI_values_data_visualize_0624basecase.m
totalLogLikelihood.m		totalLogLikelihood.m
traceplots_0417_together_withinlogL.m		traceplots_0417_together_withinlogL.m
write_matrix_new.m		write_matrix_new.m

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This README.txt file was generated on 2025/01/14 by Li Yichi 

Ⅰ.
#Codes for Yichi's recent research "Estimating transmission dynamics and severity of SARS-CoV-2 Omicron following adjustment of zero-COVID policy in Shenzhen, China: a modeling study"


Ⅱ.
-------------------
GENERAL INFORMATION
-------------------

Author Information:

Name: Li Yichi
Faculty: The University of Hong Kong (HKU)
Email: [email protected]


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DATA & FILE OVERVIEW
-------------------

In accordance with the study and protocol requirements, you may contact the first author or corresponding author to request a copy.