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De novo assembly from Oxford Nanopore reads.

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Shasta long read assembler

De novo assembler for long reads, optimized for Oxford Nanopore (ONT) reads.

For quick start information see here.

The complete user documentation is available here.

Please file GitHub issues to report problems, request help, or ask questions. Please keep each issue on a single topic when possible.

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De novo assembly from Oxford Nanopore reads.

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