All pull requests

Pull requests

• Counterfactual drug comparative-effectiveness analysis for causal inference (rebased on pretrain_linear_prob_token)

  #194·ChaoPang opened Oct 27, 2026Collaborator·

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• Read the visit rules of a MEDS dataset from its metadata, with a yaml override

  #187·ChaoPang opened Oct 18, 2026Collaborator·

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• Depend on meds_to_cehr instead of cehrbert and cehrbert_data; choose the MEDS conversion from the data

  #186·ChaoPang opened Oct 18, 2026Collaborator·

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• Open vocab qa

  #185·ChaoPang opened Oct 16, 2026Collaborator·

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• Add a tool to embed OMOP concept names and check how they cluster

  #172·ChaoPang opened Oct 15, 2026Collaborator·

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• Add sinusoidal embeddings for time tokens

  #160·ChaoPang opened Oct 6, 2026Collaborator·

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• Counterfactual drug ce estimation

  #142·ChaoPang opened Jul 26, 2026Collaborator·

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• Pretrain linear prob token

  #121·ChaoPang opened Sep 16, 2025Collaborator·

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• Treatment pathway

  #95·ChaoPang opened Jul 27, 2025Collaborator·

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• Dev rebase (#91)

  #92·ChaoPang opened Jul 20, 2025Collaborator·

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• Dev

  #50·ChaoPang opened Feb 26, 2025Collaborator·

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