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Fixing merge (choosing work performed on MacBook over the last few days)
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Kris Alavattam committed Jul 27, 2023
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1. [Problem](#problem-1)
1. [Maybe](#maybe)
1. [Email to Robin Dowell](#email-to-robin-dowell)
1. [Update](#update)
1. [Lidschreiber, Easter et al. \(Passmore, Cramer\) `** ... **`](#lidschreiber-easter-et-al-passmore-cramer---)
1. [How I found this article](#how-i-found-this-article)
1. [Question](#question-4)
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</details>
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<a id="update"></a>
##### Update
Never received a response from Dr. Dowell.

<a id="lidschreiber-easter-et-al-passmore-cramer---"></a>
### Lidschreiber, Easter et al. (Passmore, Cramer) `** ... **`
<details>
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<details>
<summary><i>Notes, code: Include SGD R64-1-1 ncRNAs</i></summary>

`gtf` of SGD `R64-1-1` ncRNAs were processed/isolated from [`saccharomyces_cerevisiae_R64-1-1_20110208.gff`](http://sgd-archive.yeastgenome.org/sequence/S288C_reference/genome_releases/S288C_reference_genome_R64-1-1_20110203.tgz) in [`work_assess-process_R64-1-1-gff3_categorize-Trinity-transfrags_part-1.Rmd`](./work_assess-process_R64-1-1_gff3.Rmd).
`gtf` of SGD `R64-1-1` ncRNAs were processed/isolated from [`saccharomyces_cerevisiae_R64-1-1_20110208.gff`](http://sgd-archive.yeastgenome.org/sequence/S288C_reference/genome_releases/S288C_reference_genome_R64-1-1_20110203.tgz) in [`work_assess-process_R64-1-1-gff3_categorize-Trinity-transfrags_part-1.Rmd`](./work_assess-process_R64-1-1-gff3_categorize-Trinity-transfrags_part-1.Rmd).
```bash
#!/bin/bash

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