Switch to src layout (openvinotoolkit#921)

* Moved anomalib to src * Modified setup.py to provide the right package path * Update dev requirements * Update pyproject.toml file with coverage settings * Update tox.ini
jpcbertoldo · Mar 9, 2023 · 5cadb65 · 5cadb65
1 parent d0b8ce8
commit 5cadb65
Show file tree

Hide file tree

Showing 213 changed files with 41 additions and 15 deletions.
diff --git a/notebooks/000_getting_started/001_getting_started.ipynb b/notebooks/000_getting_started/001_getting_started.ipynb
@@ -181,7 +181,7 @@
    "outputs": [],
    "source": [
     "MODEL = \"padim\"  # 'padim', 'cflow', 'stfpm', 'ganomaly', 'dfkde', 'patchcore'\n",
-    "CONFIG_PATH = root_directory / f\"anomalib/models/{MODEL}/config.yaml\"\n",
+    "CONFIG_PATH = root_directory / f\"src/anomalib/models/{MODEL}/config.yaml\"\n",
     "with open(file=CONFIG_PATH, mode=\"r\", encoding=\"utf-8\") as file:\n",
     "    print(file.read())"
    ]

diff --git a/pyproject.toml b/pyproject.toml
@@ -73,6 +73,19 @@ follow_imports = "skip"
 follow_imports_for_stubs = true
 
 
+# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #
+# PYTEST CONFIGURATION                                                        #
+[tool.pytest.ini_options]
+addopts = [
+    "--strict-markers",
+    "--strict-config",
+    "--showlocals",
+    "-ra",
+]
+testpaths = "tests"
+pythonpath = "src"
+
+
 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #
 # COVERAGE CONFIGURATION                                                      #
 [tool.coverage.report]
@@ -84,6 +97,11 @@ exclude_lines = [
     "raise ValueError",
 ]
 
+[tool.coverage.paths]
+source = [
+    "src",
+    ".tox/*/site-packages",
+]
 
 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #
 # NBQA CONFIGURATION                                                          #

diff --git a/requirements/dev.txt b/requirements/dev.txt
@@ -1,3 +1,7 @@
 pre-commit
 pytest
+pytest-cov
+pytest-sugar
+pytest-xdist
+coverage[toml]
 tox
diff --git a/setup.py b/setup.py
@@ -12,7 +12,7 @@
 from setuptools import find_packages, setup
 
 
-def load_module(name: str = "anomalib/__init__.py") -> ModuleType:
+def load_module(name: str = "src/anomalib/__init__.py") -> ModuleType:
     """Load Python Module.
 
     Args:
@@ -45,7 +45,7 @@ def get_version() -> str:
     Returns:
         str: `anomalib` version.
     """
-    anomalib = load_module(name="anomalib/__init__.py")
+    anomalib = load_module(name="src/anomalib/__init__.py")
     version = anomalib.__version__
     return version
 
@@ -102,7 +102,8 @@ def get_required_packages(requirement_files: list[str]) -> list[str]:
     'Licensed under the Apache License, Version 2.0 (the "License")'
     "See LICENSE file for more details.",
     python_requires=">=3.7",
-    packages=find_packages(exclude=("tests",)),
+    package_dir={"": "src"},
+    packages=find_packages(where="src", include=["anomalib", "anomalib.*"]),
     install_requires=INSTALL_REQUIRES,
     extras_require=EXTRAS_REQUIRE,
     package_data={"": ["config.yaml"]},

diff --git a/anomalib/__init__.py → src/anomalib/__init__.py b/anomalib/__init__.py → src/anomalib/__init__.py
diff --git a/anomalib/config/__init__.py → src/anomalib/config/__init__.py b/anomalib/config/__init__.py → src/anomalib/config/__init__.py
diff --git a/anomalib/config/config.py → src/anomalib/config/config.py b/anomalib/config/config.py → src/anomalib/config/config.py
@@ -226,7 +226,7 @@ def get_configurable_parameters(
         )
 
     if config_path is None:
-        config_path = Path(f"anomalib/models/{model_name}/{config_filename}.{config_file_extension}")
+        config_path = Path(f"src/anomalib/models/{model_name}/{config_filename}.{config_file_extension}")
 
     config = OmegaConf.load(config_path)
 

diff --git a/anomalib/data/__init__.py → src/anomalib/data/__init__.py b/anomalib/data/__init__.py → src/anomalib/data/__init__.py
diff --git a/anomalib/data/avenue.py → src/anomalib/data/avenue.py b/anomalib/data/avenue.py → src/anomalib/data/avenue.py
diff --git a/anomalib/data/base/__init__.py → src/anomalib/data/base/__init__.py b/anomalib/data/base/__init__.py → src/anomalib/data/base/__init__.py
diff --git a/anomalib/data/base/datamodule.py → src/anomalib/data/base/datamodule.py b/anomalib/data/base/datamodule.py → src/anomalib/data/base/datamodule.py
diff --git a/anomalib/data/base/dataset.py → src/anomalib/data/base/dataset.py b/anomalib/data/base/dataset.py → src/anomalib/data/base/dataset.py
diff --git a/anomalib/data/base/depth.py → src/anomalib/data/base/depth.py b/anomalib/data/base/depth.py → src/anomalib/data/base/depth.py
diff --git a/anomalib/data/base/video.py → src/anomalib/data/base/video.py b/anomalib/data/base/video.py → src/anomalib/data/base/video.py
diff --git a/anomalib/data/btech.py → src/anomalib/data/btech.py b/anomalib/data/btech.py → src/anomalib/data/btech.py
diff --git a/anomalib/data/folder.py → src/anomalib/data/folder.py b/anomalib/data/folder.py → src/anomalib/data/folder.py
diff --git a/anomalib/data/folder_3d.py → src/anomalib/data/folder_3d.py b/anomalib/data/folder_3d.py → src/anomalib/data/folder_3d.py
diff --git a/anomalib/data/inference.py → src/anomalib/data/inference.py b/anomalib/data/inference.py → src/anomalib/data/inference.py
diff --git a/anomalib/data/mvtec.py → src/anomalib/data/mvtec.py b/anomalib/data/mvtec.py → src/anomalib/data/mvtec.py
diff --git a/anomalib/data/mvtec_3d.py → src/anomalib/data/mvtec_3d.py b/anomalib/data/mvtec_3d.py → src/anomalib/data/mvtec_3d.py
diff --git a/anomalib/data/shanghaitech.py → src/anomalib/data/shanghaitech.py b/anomalib/data/shanghaitech.py → src/anomalib/data/shanghaitech.py
diff --git a/anomalib/data/synthetic.py → src/anomalib/data/synthetic.py b/anomalib/data/synthetic.py → src/anomalib/data/synthetic.py
diff --git a/anomalib/data/task_type.py → src/anomalib/data/task_type.py b/anomalib/data/task_type.py → src/anomalib/data/task_type.py
diff --git a/anomalib/data/ucsd_ped.py → src/anomalib/data/ucsd_ped.py b/anomalib/data/ucsd_ped.py → src/anomalib/data/ucsd_ped.py
diff --git a/anomalib/data/utils/__init__.py → src/anomalib/data/utils/__init__.py b/anomalib/data/utils/__init__.py → src/anomalib/data/utils/__init__.py
diff --git a/anomalib/data/utils/augmenter.py → src/anomalib/data/utils/augmenter.py b/anomalib/data/utils/augmenter.py → src/anomalib/data/utils/augmenter.py
diff --git a/anomalib/data/utils/boxes.py → src/anomalib/data/utils/boxes.py b/anomalib/data/utils/boxes.py → src/anomalib/data/utils/boxes.py
diff --git a/anomalib/data/utils/download.py → src/anomalib/data/utils/download.py b/anomalib/data/utils/download.py → src/anomalib/data/utils/download.py
diff --git a/anomalib/data/utils/generators/__init__.py → ...nomalib/data/utils/generators/__init__.py b/anomalib/data/utils/generators/__init__.py → ...nomalib/data/utils/generators/__init__.py
diff --git a/anomalib/data/utils/generators/perlin.py → src/anomalib/data/utils/generators/perlin.py b/anomalib/data/utils/generators/perlin.py → src/anomalib/data/utils/generators/perlin.py
diff --git a/anomalib/data/utils/image.py → src/anomalib/data/utils/image.py b/anomalib/data/utils/image.py → src/anomalib/data/utils/image.py
diff --git a/anomalib/data/utils/path.py → src/anomalib/data/utils/path.py b/anomalib/data/utils/path.py → src/anomalib/data/utils/path.py
diff --git a/anomalib/data/utils/split.py → src/anomalib/data/utils/split.py b/anomalib/data/utils/split.py → src/anomalib/data/utils/split.py
diff --git a/anomalib/data/utils/transform.py → src/anomalib/data/utils/transform.py b/anomalib/data/utils/transform.py → src/anomalib/data/utils/transform.py
diff --git a/anomalib/data/utils/video.py → src/anomalib/data/utils/video.py b/anomalib/data/utils/video.py → src/anomalib/data/utils/video.py
diff --git a/anomalib/data/visa.py → src/anomalib/data/visa.py b/anomalib/data/visa.py → src/anomalib/data/visa.py
diff --git a/anomalib/deploy/__init__.py → src/anomalib/deploy/__init__.py b/anomalib/deploy/__init__.py → src/anomalib/deploy/__init__.py
diff --git a/anomalib/deploy/export.py → src/anomalib/deploy/export.py b/anomalib/deploy/export.py → src/anomalib/deploy/export.py
diff --git a/anomalib/deploy/inferencers/__init__.py → src/anomalib/deploy/inferencers/__init__.py b/anomalib/deploy/inferencers/__init__.py → src/anomalib/deploy/inferencers/__init__.py
diff --git a/...lib/deploy/inferencers/base_inferencer.py → ...lib/deploy/inferencers/base_inferencer.py b/...lib/deploy/inferencers/base_inferencer.py → ...lib/deploy/inferencers/base_inferencer.py
diff --git a/...deploy/inferencers/openvino_inferencer.py → ...deploy/inferencers/openvino_inferencer.py b/...deploy/inferencers/openvino_inferencer.py → ...deploy/inferencers/openvino_inferencer.py
diff --git a/...ib/deploy/inferencers/torch_inferencer.py → ...ib/deploy/inferencers/torch_inferencer.py b/...ib/deploy/inferencers/torch_inferencer.py → ...ib/deploy/inferencers/torch_inferencer.py
diff --git a/anomalib/models/__init__.py → src/anomalib/models/__init__.py b/anomalib/models/__init__.py → src/anomalib/models/__init__.py
diff --git a/anomalib/models/cfa/README.md → src/anomalib/models/cfa/README.md b/anomalib/models/cfa/README.md → src/anomalib/models/cfa/README.md
diff --git a/anomalib/models/cfa/__init__.py → src/anomalib/models/cfa/__init__.py b/anomalib/models/cfa/__init__.py → src/anomalib/models/cfa/__init__.py
diff --git a/anomalib/models/cfa/anomaly_map.py → src/anomalib/models/cfa/anomaly_map.py b/anomalib/models/cfa/anomaly_map.py → src/anomalib/models/cfa/anomaly_map.py
diff --git a/anomalib/models/cfa/config.yaml → src/anomalib/models/cfa/config.yaml b/anomalib/models/cfa/config.yaml → src/anomalib/models/cfa/config.yaml
diff --git a/anomalib/models/cfa/lightning_model.py → src/anomalib/models/cfa/lightning_model.py b/anomalib/models/cfa/lightning_model.py → src/anomalib/models/cfa/lightning_model.py
diff --git a/anomalib/models/cfa/loss.py → src/anomalib/models/cfa/loss.py b/anomalib/models/cfa/loss.py → src/anomalib/models/cfa/loss.py
diff --git a/anomalib/models/cfa/torch_model.py → src/anomalib/models/cfa/torch_model.py b/anomalib/models/cfa/torch_model.py → src/anomalib/models/cfa/torch_model.py
diff --git a/anomalib/models/cflow/README.md → src/anomalib/models/cflow/README.md b/anomalib/models/cflow/README.md → src/anomalib/models/cflow/README.md
diff --git a/anomalib/models/cflow/__init__.py → src/anomalib/models/cflow/__init__.py b/anomalib/models/cflow/__init__.py → src/anomalib/models/cflow/__init__.py
diff --git a/anomalib/models/cflow/anomaly_map.py → src/anomalib/models/cflow/anomaly_map.py b/anomalib/models/cflow/anomaly_map.py → src/anomalib/models/cflow/anomaly_map.py
diff --git a/anomalib/models/cflow/config.yaml → src/anomalib/models/cflow/config.yaml b/anomalib/models/cflow/config.yaml → src/anomalib/models/cflow/config.yaml
diff --git a/anomalib/models/cflow/lightning_model.py → src/anomalib/models/cflow/lightning_model.py b/anomalib/models/cflow/lightning_model.py → src/anomalib/models/cflow/lightning_model.py
diff --git a/anomalib/models/cflow/torch_model.py → src/anomalib/models/cflow/torch_model.py b/anomalib/models/cflow/torch_model.py → src/anomalib/models/cflow/torch_model.py
diff --git a/anomalib/models/cflow/utils.py → src/anomalib/models/cflow/utils.py b/anomalib/models/cflow/utils.py → src/anomalib/models/cflow/utils.py
diff --git a/anomalib/models/components/__init__.py → src/anomalib/models/components/__init__.py b/anomalib/models/components/__init__.py → src/anomalib/models/components/__init__.py
diff --git a/anomalib/models/components/base/__init__.py → ...omalib/models/components/base/__init__.py b/anomalib/models/components/base/__init__.py → ...omalib/models/components/base/__init__.py
diff --git a/.../models/components/base/anomaly_module.py → .../models/components/base/anomaly_module.py b/.../models/components/base/anomaly_module.py → .../models/components/base/anomaly_module.py
diff --git a/.../models/components/base/dynamic_module.py → .../models/components/base/dynamic_module.py b/.../models/components/base/dynamic_module.py → .../models/components/base/dynamic_module.py
diff --git a/...els/components/classification/__init__.py → ...els/components/classification/__init__.py b/...els/components/classification/__init__.py → ...els/components/classification/__init__.py
diff --git a/...mponents/classification/kde_classifier.py → ...mponents/classification/kde_classifier.py b/...mponents/classification/kde_classifier.py → ...mponents/classification/kde_classifier.py
diff --git a/...ents/dimensionality_reduction/__init__.py → ...ents/dimensionality_reduction/__init__.py b/...ents/dimensionality_reduction/__init__.py → ...ents/dimensionality_reduction/__init__.py
diff --git a/...omponents/dimensionality_reduction/pca.py → ...omponents/dimensionality_reduction/pca.py b/...omponents/dimensionality_reduction/pca.py → ...omponents/dimensionality_reduction/pca.py
diff --git a/...nsionality_reduction/random_projection.py → ...nsionality_reduction/random_projection.py b/...nsionality_reduction/random_projection.py → ...nsionality_reduction/random_projection.py
diff --git a/...components/feature_extractors/__init__.py → ...components/feature_extractors/__init__.py b/...components/feature_extractors/__init__.py → ...components/feature_extractors/__init__.py
diff --git a/...els/components/feature_extractors/timm.py → ...els/components/feature_extractors/timm.py b/...els/components/feature_extractors/timm.py → ...els/components/feature_extractors/timm.py
diff --git a/.../components/feature_extractors/torchfx.py → .../components/feature_extractors/torchfx.py b/.../components/feature_extractors/torchfx.py → .../components/feature_extractors/torchfx.py
diff --git a/...ls/components/feature_extractors/utils.py → ...ls/components/feature_extractors/utils.py b/...ls/components/feature_extractors/utils.py → ...ls/components/feature_extractors/utils.py
diff --git a/...lib/models/components/filters/__init__.py → ...lib/models/components/filters/__init__.py b/...lib/models/components/filters/__init__.py → ...lib/models/components/filters/__init__.py
diff --git a/anomalib/models/components/filters/blur.py → ...nomalib/models/components/filters/blur.py b/anomalib/models/components/filters/blur.py → ...nomalib/models/components/filters/blur.py
diff --git a/...alib/models/components/layers/__init__.py → ...alib/models/components/layers/__init__.py b/...alib/models/components/layers/__init__.py → ...alib/models/components/layers/__init__.py
diff --git a/anomalib/models/components/layers/sspcab.py → ...omalib/models/components/layers/sspcab.py b/anomalib/models/components/layers/sspcab.py → ...omalib/models/components/layers/sspcab.py
diff --git a/...ib/models/components/sampling/__init__.py → ...ib/models/components/sampling/__init__.py b/...ib/models/components/sampling/__init__.py → ...ib/models/components/sampling/__init__.py
diff --git a/...ls/components/sampling/k_center_greedy.py → ...ls/components/sampling/k_center_greedy.py b/...ls/components/sampling/k_center_greedy.py → ...ls/components/sampling/k_center_greedy.py
diff --git a/anomalib/models/components/stats/__init__.py → ...malib/models/components/stats/__init__.py b/anomalib/models/components/stats/__init__.py → ...malib/models/components/stats/__init__.py
diff --git a/anomalib/models/components/stats/kde.py → src/anomalib/models/components/stats/kde.py b/anomalib/models/components/stats/kde.py → src/anomalib/models/components/stats/kde.py
diff --git a/...omponents/stats/multi_variate_gaussian.py → ...omponents/stats/multi_variate_gaussian.py b/...omponents/stats/multi_variate_gaussian.py → ...omponents/stats/multi_variate_gaussian.py
diff --git a/anomalib/models/csflow/README.md → src/anomalib/models/csflow/README.md b/anomalib/models/csflow/README.md → src/anomalib/models/csflow/README.md
diff --git a/anomalib/models/csflow/__init__.py → src/anomalib/models/csflow/__init__.py b/anomalib/models/csflow/__init__.py → src/anomalib/models/csflow/__init__.py
diff --git a/anomalib/models/csflow/anomaly_map.py → src/anomalib/models/csflow/anomaly_map.py b/anomalib/models/csflow/anomaly_map.py → src/anomalib/models/csflow/anomaly_map.py
diff --git a/anomalib/models/csflow/config.yaml → src/anomalib/models/csflow/config.yaml b/anomalib/models/csflow/config.yaml → src/anomalib/models/csflow/config.yaml
diff --git a/anomalib/models/csflow/lightning_model.py → ...anomalib/models/csflow/lightning_model.py b/anomalib/models/csflow/lightning_model.py → ...anomalib/models/csflow/lightning_model.py
diff --git a/anomalib/models/csflow/loss.py → src/anomalib/models/csflow/loss.py b/anomalib/models/csflow/loss.py → src/anomalib/models/csflow/loss.py
diff --git a/anomalib/models/csflow/torch_model.py → src/anomalib/models/csflow/torch_model.py b/anomalib/models/csflow/torch_model.py → src/anomalib/models/csflow/torch_model.py
diff --git a/anomalib/models/dfkde/README.md → src/anomalib/models/dfkde/README.md b/anomalib/models/dfkde/README.md → src/anomalib/models/dfkde/README.md
diff --git a/anomalib/models/dfkde/__init__.py → src/anomalib/models/dfkde/__init__.py b/anomalib/models/dfkde/__init__.py → src/anomalib/models/dfkde/__init__.py
diff --git a/anomalib/models/dfkde/config.yaml → src/anomalib/models/dfkde/config.yaml b/anomalib/models/dfkde/config.yaml → src/anomalib/models/dfkde/config.yaml
diff --git a/anomalib/models/dfkde/lightning_model.py → src/anomalib/models/dfkde/lightning_model.py b/anomalib/models/dfkde/lightning_model.py → src/anomalib/models/dfkde/lightning_model.py
diff --git a/anomalib/models/dfkde/torch_model.py → src/anomalib/models/dfkde/torch_model.py b/anomalib/models/dfkde/torch_model.py → src/anomalib/models/dfkde/torch_model.py
diff --git a/anomalib/models/dfm/README.md → src/anomalib/models/dfm/README.md b/anomalib/models/dfm/README.md → src/anomalib/models/dfm/README.md
diff --git a/anomalib/models/dfm/__init__.py → src/anomalib/models/dfm/__init__.py b/anomalib/models/dfm/__init__.py → src/anomalib/models/dfm/__init__.py
diff --git a/anomalib/models/dfm/config.yaml → src/anomalib/models/dfm/config.yaml b/anomalib/models/dfm/config.yaml → src/anomalib/models/dfm/config.yaml
diff --git a/anomalib/models/dfm/lightning_model.py → src/anomalib/models/dfm/lightning_model.py b/anomalib/models/dfm/lightning_model.py → src/anomalib/models/dfm/lightning_model.py
diff --git a/anomalib/models/dfm/torch_model.py → src/anomalib/models/dfm/torch_model.py b/anomalib/models/dfm/torch_model.py → src/anomalib/models/dfm/torch_model.py
diff --git a/anomalib/models/draem/LICENSE → src/anomalib/models/draem/LICENSE b/anomalib/models/draem/LICENSE → src/anomalib/models/draem/LICENSE
diff --git a/anomalib/models/draem/README.md → src/anomalib/models/draem/README.md b/anomalib/models/draem/README.md → src/anomalib/models/draem/README.md
diff --git a/anomalib/models/draem/__init__.py → src/anomalib/models/draem/__init__.py b/anomalib/models/draem/__init__.py → src/anomalib/models/draem/__init__.py
diff --git a/anomalib/models/draem/config.yaml → src/anomalib/models/draem/config.yaml b/anomalib/models/draem/config.yaml → src/anomalib/models/draem/config.yaml
diff --git a/anomalib/models/draem/lightning_model.py → src/anomalib/models/draem/lightning_model.py b/anomalib/models/draem/lightning_model.py → src/anomalib/models/draem/lightning_model.py
diff --git a/anomalib/models/draem/loss.py → src/anomalib/models/draem/loss.py b/anomalib/models/draem/loss.py → src/anomalib/models/draem/loss.py
diff --git a/anomalib/models/draem/torch_model.py → src/anomalib/models/draem/torch_model.py b/anomalib/models/draem/torch_model.py → src/anomalib/models/draem/torch_model.py
diff --git a/anomalib/models/fastflow/README.md → src/anomalib/models/fastflow/README.md b/anomalib/models/fastflow/README.md → src/anomalib/models/fastflow/README.md
diff --git a/anomalib/models/fastflow/__init__.py → src/anomalib/models/fastflow/__init__.py b/anomalib/models/fastflow/__init__.py → src/anomalib/models/fastflow/__init__.py
diff --git a/anomalib/models/fastflow/anomaly_map.py → src/anomalib/models/fastflow/anomaly_map.py b/anomalib/models/fastflow/anomaly_map.py → src/anomalib/models/fastflow/anomaly_map.py
diff --git a/anomalib/models/fastflow/config.yaml → src/anomalib/models/fastflow/config.yaml b/anomalib/models/fastflow/config.yaml → src/anomalib/models/fastflow/config.yaml
diff --git a/anomalib/models/fastflow/lightning_model.py → ...omalib/models/fastflow/lightning_model.py b/anomalib/models/fastflow/lightning_model.py → ...omalib/models/fastflow/lightning_model.py
diff --git a/anomalib/models/fastflow/loss.py → src/anomalib/models/fastflow/loss.py b/anomalib/models/fastflow/loss.py → src/anomalib/models/fastflow/loss.py
diff --git a/anomalib/models/fastflow/torch_model.py → src/anomalib/models/fastflow/torch_model.py b/anomalib/models/fastflow/torch_model.py → src/anomalib/models/fastflow/torch_model.py
diff --git a/anomalib/models/ganomaly/README.md → src/anomalib/models/ganomaly/README.md b/anomalib/models/ganomaly/README.md → src/anomalib/models/ganomaly/README.md
diff --git a/anomalib/models/ganomaly/__init__.py → src/anomalib/models/ganomaly/__init__.py b/anomalib/models/ganomaly/__init__.py → src/anomalib/models/ganomaly/__init__.py
diff --git a/anomalib/models/ganomaly/config.yaml → src/anomalib/models/ganomaly/config.yaml b/anomalib/models/ganomaly/config.yaml → src/anomalib/models/ganomaly/config.yaml
diff --git a/anomalib/models/ganomaly/lightning_model.py → ...omalib/models/ganomaly/lightning_model.py b/anomalib/models/ganomaly/lightning_model.py → ...omalib/models/ganomaly/lightning_model.py
diff --git a/anomalib/models/ganomaly/loss.py → src/anomalib/models/ganomaly/loss.py b/anomalib/models/ganomaly/loss.py → src/anomalib/models/ganomaly/loss.py
diff --git a/anomalib/models/ganomaly/torch_model.py → src/anomalib/models/ganomaly/torch_model.py b/anomalib/models/ganomaly/torch_model.py → src/anomalib/models/ganomaly/torch_model.py
diff --git a/anomalib/models/padim/README.md → src/anomalib/models/padim/README.md b/anomalib/models/padim/README.md → src/anomalib/models/padim/README.md
diff --git a/anomalib/models/padim/__init__.py → src/anomalib/models/padim/__init__.py b/anomalib/models/padim/__init__.py → src/anomalib/models/padim/__init__.py
diff --git a/anomalib/models/padim/anomaly_map.py → src/anomalib/models/padim/anomaly_map.py b/anomalib/models/padim/anomaly_map.py → src/anomalib/models/padim/anomaly_map.py
diff --git a/anomalib/models/padim/config.yaml → src/anomalib/models/padim/config.yaml b/anomalib/models/padim/config.yaml → src/anomalib/models/padim/config.yaml
diff --git a/anomalib/models/padim/lightning_model.py → src/anomalib/models/padim/lightning_model.py b/anomalib/models/padim/lightning_model.py → src/anomalib/models/padim/lightning_model.py
diff --git a/anomalib/models/padim/torch_model.py → src/anomalib/models/padim/torch_model.py b/anomalib/models/padim/torch_model.py → src/anomalib/models/padim/torch_model.py
diff --git a/anomalib/models/patchcore/README.md → src/anomalib/models/patchcore/README.md b/anomalib/models/patchcore/README.md → src/anomalib/models/patchcore/README.md
diff --git a/anomalib/models/patchcore/__init__.py → src/anomalib/models/patchcore/__init__.py b/anomalib/models/patchcore/__init__.py → src/anomalib/models/patchcore/__init__.py
diff --git a/anomalib/models/patchcore/anomaly_map.py → src/anomalib/models/patchcore/anomaly_map.py b/anomalib/models/patchcore/anomaly_map.py → src/anomalib/models/patchcore/anomaly_map.py
diff --git a/anomalib/models/patchcore/config.yaml → src/anomalib/models/patchcore/config.yaml b/anomalib/models/patchcore/config.yaml → src/anomalib/models/patchcore/config.yaml
diff --git a/anomalib/models/patchcore/lightning_model.py → ...malib/models/patchcore/lightning_model.py b/anomalib/models/patchcore/lightning_model.py → ...malib/models/patchcore/lightning_model.py
diff --git a/anomalib/models/patchcore/torch_model.py → src/anomalib/models/patchcore/torch_model.py b/anomalib/models/patchcore/torch_model.py → src/anomalib/models/patchcore/torch_model.py
diff --git a/anomalib/models/reverse_distillation/LICENSE → ...malib/models/reverse_distillation/LICENSE b/anomalib/models/reverse_distillation/LICENSE → ...malib/models/reverse_distillation/LICENSE
diff --git a/...lib/models/reverse_distillation/README.md → ...lib/models/reverse_distillation/README.md b/...lib/models/reverse_distillation/README.md → ...lib/models/reverse_distillation/README.md
diff --git a/...b/models/reverse_distillation/__init__.py → ...b/models/reverse_distillation/__init__.py b/...b/models/reverse_distillation/__init__.py → ...b/models/reverse_distillation/__init__.py
diff --git a/...odels/reverse_distillation/anomaly_map.py → ...odels/reverse_distillation/anomaly_map.py b/...odels/reverse_distillation/anomaly_map.py → ...odels/reverse_distillation/anomaly_map.py
diff --git a/...verse_distillation/components/__init__.py → ...verse_distillation/components/__init__.py b/...verse_distillation/components/__init__.py → ...verse_distillation/components/__init__.py
diff --git a/...rse_distillation/components/bottleneck.py → ...rse_distillation/components/bottleneck.py b/...rse_distillation/components/bottleneck.py → ...rse_distillation/components/bottleneck.py
diff --git a/...erse_distillation/components/de_resnet.py → ...erse_distillation/components/de_resnet.py b/...erse_distillation/components/de_resnet.py → ...erse_distillation/components/de_resnet.py
diff --git a/...b/models/reverse_distillation/config.yaml → ...b/models/reverse_distillation/config.yaml b/...b/models/reverse_distillation/config.yaml → ...b/models/reverse_distillation/config.yaml
diff --git a/...s/reverse_distillation/lightning_model.py → ...s/reverse_distillation/lightning_model.py b/...s/reverse_distillation/lightning_model.py → ...s/reverse_distillation/lightning_model.py
diff --git a/anomalib/models/reverse_distillation/loss.py → ...malib/models/reverse_distillation/loss.py b/anomalib/models/reverse_distillation/loss.py → ...malib/models/reverse_distillation/loss.py
diff --git a/...odels/reverse_distillation/torch_model.py → ...odels/reverse_distillation/torch_model.py b/...odels/reverse_distillation/torch_model.py → ...odels/reverse_distillation/torch_model.py
diff --git a/anomalib/models/rkde/README.md → src/anomalib/models/rkde/README.md b/anomalib/models/rkde/README.md → src/anomalib/models/rkde/README.md
diff --git a/anomalib/models/rkde/__init__.py → src/anomalib/models/rkde/__init__.py b/anomalib/models/rkde/__init__.py → src/anomalib/models/rkde/__init__.py
diff --git a/anomalib/models/rkde/config.yaml → src/anomalib/models/rkde/config.yaml b/anomalib/models/rkde/config.yaml → src/anomalib/models/rkde/config.yaml
diff --git a/anomalib/models/rkde/feature_extractor.py → ...anomalib/models/rkde/feature_extractor.py b/anomalib/models/rkde/feature_extractor.py → ...anomalib/models/rkde/feature_extractor.py
diff --git a/anomalib/models/rkde/lightning_model.py → src/anomalib/models/rkde/lightning_model.py b/anomalib/models/rkde/lightning_model.py → src/anomalib/models/rkde/lightning_model.py
diff --git a/anomalib/models/rkde/region_extractor.py → src/anomalib/models/rkde/region_extractor.py b/anomalib/models/rkde/region_extractor.py → src/anomalib/models/rkde/region_extractor.py
diff --git a/anomalib/models/rkde/torch_model.py → src/anomalib/models/rkde/torch_model.py b/anomalib/models/rkde/torch_model.py → src/anomalib/models/rkde/torch_model.py
diff --git a/anomalib/models/stfpm/README.md → src/anomalib/models/stfpm/README.md b/anomalib/models/stfpm/README.md → src/anomalib/models/stfpm/README.md
diff --git a/anomalib/models/stfpm/__init__.py → src/anomalib/models/stfpm/__init__.py b/anomalib/models/stfpm/__init__.py → src/anomalib/models/stfpm/__init__.py
diff --git a/anomalib/models/stfpm/anomaly_map.py → src/anomalib/models/stfpm/anomaly_map.py b/anomalib/models/stfpm/anomaly_map.py → src/anomalib/models/stfpm/anomaly_map.py
diff --git a/anomalib/models/stfpm/config.yaml → src/anomalib/models/stfpm/config.yaml b/anomalib/models/stfpm/config.yaml → src/anomalib/models/stfpm/config.yaml
diff --git a/anomalib/models/stfpm/lightning_model.py → src/anomalib/models/stfpm/lightning_model.py b/anomalib/models/stfpm/lightning_model.py → src/anomalib/models/stfpm/lightning_model.py
diff --git a/anomalib/models/stfpm/loss.py → src/anomalib/models/stfpm/loss.py b/anomalib/models/stfpm/loss.py → src/anomalib/models/stfpm/loss.py
diff --git a/anomalib/models/stfpm/torch_model.py → src/anomalib/models/stfpm/torch_model.py b/anomalib/models/stfpm/torch_model.py → src/anomalib/models/stfpm/torch_model.py
diff --git a/anomalib/post_processing/__init__.py → src/anomalib/post_processing/__init__.py b/anomalib/post_processing/__init__.py → src/anomalib/post_processing/__init__.py
diff --git a/...post_processing/normalization/__init__.py → ...post_processing/normalization/__init__.py b/...post_processing/normalization/__init__.py → ...post_processing/normalization/__init__.py
diff --git a/...alib/post_processing/normalization/cdf.py → ...alib/post_processing/normalization/cdf.py b/...alib/post_processing/normalization/cdf.py → ...alib/post_processing/normalization/cdf.py
diff --git a/.../post_processing/normalization/min_max.py → .../post_processing/normalization/min_max.py b/.../post_processing/normalization/min_max.py → .../post_processing/normalization/min_max.py
diff --git a/anomalib/post_processing/post_process.py → src/anomalib/post_processing/post_process.py b/anomalib/post_processing/post_process.py → src/anomalib/post_processing/post_process.py
diff --git a/anomalib/post_processing/visualizer.py → src/anomalib/post_processing/visualizer.py b/anomalib/post_processing/visualizer.py → src/anomalib/post_processing/visualizer.py
diff --git a/anomalib/pre_processing/__init__.py → src/anomalib/pre_processing/__init__.py b/anomalib/pre_processing/__init__.py → src/anomalib/pre_processing/__init__.py
diff --git a/anomalib/pre_processing/pre_process.py → src/anomalib/pre_processing/pre_process.py b/anomalib/pre_processing/pre_process.py → src/anomalib/pre_processing/pre_process.py
diff --git a/anomalib/pre_processing/tiler.py → src/anomalib/pre_processing/tiler.py b/anomalib/pre_processing/tiler.py → src/anomalib/pre_processing/tiler.py
diff --git a/...lib/pre_processing/transforms/__init__.py → ...lib/pre_processing/transforms/__init__.py b/...lib/pre_processing/transforms/__init__.py → ...lib/pre_processing/transforms/__init__.py
diff --git a/anomalib/pre_processing/transforms/custom.py → ...malib/pre_processing/transforms/custom.py b/anomalib/pre_processing/transforms/custom.py → ...malib/pre_processing/transforms/custom.py
diff --git a/anomalib/utils/__init__.py → src/anomalib/utils/__init__.py b/anomalib/utils/__init__.py → src/anomalib/utils/__init__.py
diff --git a/anomalib/utils/callbacks/__init__.py → src/anomalib/utils/callbacks/__init__.py b/anomalib/utils/callbacks/__init__.py → src/anomalib/utils/callbacks/__init__.py
diff --git a/...alib/utils/callbacks/cdf_normalization.py → ...alib/utils/callbacks/cdf_normalization.py b/...alib/utils/callbacks/cdf_normalization.py → ...alib/utils/callbacks/cdf_normalization.py
diff --git a/anomalib/utils/callbacks/export.py → src/anomalib/utils/callbacks/export.py b/anomalib/utils/callbacks/export.py → src/anomalib/utils/callbacks/export.py
diff --git a/anomalib/utils/callbacks/graph.py → src/anomalib/utils/callbacks/graph.py b/anomalib/utils/callbacks/graph.py → src/anomalib/utils/callbacks/graph.py
diff --git a/.../utils/callbacks/metrics_configuration.py → .../utils/callbacks/metrics_configuration.py b/.../utils/callbacks/metrics_configuration.py → .../utils/callbacks/metrics_configuration.py
diff --git a/.../utils/callbacks/min_max_normalization.py → .../utils/callbacks/min_max_normalization.py b/.../utils/callbacks/min_max_normalization.py → .../utils/callbacks/min_max_normalization.py
diff --git a/anomalib/utils/callbacks/model_loader.py → src/anomalib/utils/callbacks/model_loader.py b/anomalib/utils/callbacks/model_loader.py → src/anomalib/utils/callbacks/model_loader.py
diff --git a/anomalib/utils/callbacks/nncf/__init__.py → ...anomalib/utils/callbacks/nncf/__init__.py b/anomalib/utils/callbacks/nncf/__init__.py → ...anomalib/utils/callbacks/nncf/__init__.py
diff --git a/anomalib/utils/callbacks/nncf/callback.py → ...anomalib/utils/callbacks/nncf/callback.py b/anomalib/utils/callbacks/nncf/callback.py → ...anomalib/utils/callbacks/nncf/callback.py
diff --git a/anomalib/utils/callbacks/nncf/utils.py → src/anomalib/utils/callbacks/nncf/utils.py b/anomalib/utils/callbacks/nncf/utils.py → src/anomalib/utils/callbacks/nncf/utils.py
diff --git a/...allbacks/post_processing_configuration.py → ...allbacks/post_processing_configuration.py b/...allbacks/post_processing_configuration.py → ...allbacks/post_processing_configuration.py
diff --git a/...ib/utils/callbacks/tiler_configuration.py → ...ib/utils/callbacks/tiler_configuration.py b/...ib/utils/callbacks/tiler_configuration.py → ...ib/utils/callbacks/tiler_configuration.py
diff --git a/anomalib/utils/callbacks/timer.py → src/anomalib/utils/callbacks/timer.py b/anomalib/utils/callbacks/timer.py → src/anomalib/utils/callbacks/timer.py
diff --git a/...ib/utils/callbacks/visualizer/__init__.py → ...ib/utils/callbacks/visualizer/__init__.py b/...ib/utils/callbacks/visualizer/__init__.py → ...ib/utils/callbacks/visualizer/__init__.py
diff --git a/...s/callbacks/visualizer/visualizer_base.py → ...s/callbacks/visualizer/visualizer_base.py b/...s/callbacks/visualizer/visualizer_base.py → ...s/callbacks/visualizer/visualizer_base.py
diff --git a/.../callbacks/visualizer/visualizer_image.py → .../callbacks/visualizer/visualizer_image.py b/.../callbacks/visualizer/visualizer_image.py → .../callbacks/visualizer/visualizer_image.py
diff --git a/...callbacks/visualizer/visualizer_metric.py → ...callbacks/visualizer/visualizer_metric.py b/...callbacks/visualizer/visualizer_metric.py → ...callbacks/visualizer/visualizer_metric.py
diff --git a/anomalib/utils/cli/__init__.py → src/anomalib/utils/cli/__init__.py b/anomalib/utils/cli/__init__.py → src/anomalib/utils/cli/__init__.py
diff --git a/anomalib/utils/cli/cli.py → src/anomalib/utils/cli/cli.py b/anomalib/utils/cli/cli.py → src/anomalib/utils/cli/cli.py
diff --git a/anomalib/utils/cv/__init__.py → src/anomalib/utils/cv/__init__.py b/anomalib/utils/cv/__init__.py → src/anomalib/utils/cv/__init__.py
diff --git a/anomalib/utils/cv/connected_components.py → ...anomalib/utils/cv/connected_components.py b/anomalib/utils/cv/connected_components.py → ...anomalib/utils/cv/connected_components.py
diff --git a/anomalib/utils/hpo/__init__.py → src/anomalib/utils/hpo/__init__.py b/anomalib/utils/hpo/__init__.py → src/anomalib/utils/hpo/__init__.py
diff --git a/anomalib/utils/hpo/config.py → src/anomalib/utils/hpo/config.py b/anomalib/utils/hpo/config.py → src/anomalib/utils/hpo/config.py
diff --git a/anomalib/utils/hpo/runners.py → src/anomalib/utils/hpo/runners.py b/anomalib/utils/hpo/runners.py → src/anomalib/utils/hpo/runners.py
diff --git a/anomalib/utils/loggers/__init__.py → src/anomalib/utils/loggers/__init__.py b/anomalib/utils/loggers/__init__.py → src/anomalib/utils/loggers/__init__.py
diff --git a/anomalib/utils/loggers/base.py → src/anomalib/utils/loggers/base.py b/anomalib/utils/loggers/base.py → src/anomalib/utils/loggers/base.py
diff --git a/anomalib/utils/loggers/comet.py → src/anomalib/utils/loggers/comet.py b/anomalib/utils/loggers/comet.py → src/anomalib/utils/loggers/comet.py
diff --git a/anomalib/utils/loggers/tensorboard.py → src/anomalib/utils/loggers/tensorboard.py b/anomalib/utils/loggers/tensorboard.py → src/anomalib/utils/loggers/tensorboard.py
diff --git a/anomalib/utils/loggers/wandb.py → src/anomalib/utils/loggers/wandb.py b/anomalib/utils/loggers/wandb.py → src/anomalib/utils/loggers/wandb.py
diff --git a/anomalib/utils/metrics/__init__.py → src/anomalib/utils/metrics/__init__.py b/anomalib/utils/metrics/__init__.py → src/anomalib/utils/metrics/__init__.py
diff --git a/...ils/metrics/anomaly_score_distribution.py → ...ils/metrics/anomaly_score_distribution.py b/...ils/metrics/anomaly_score_distribution.py → ...ils/metrics/anomaly_score_distribution.py
diff --git a/.../utils/metrics/anomaly_score_threshold.py → .../utils/metrics/anomaly_score_threshold.py b/.../utils/metrics/anomaly_score_threshold.py → .../utils/metrics/anomaly_score_threshold.py
diff --git a/anomalib/utils/metrics/aupr.py → src/anomalib/utils/metrics/aupr.py b/anomalib/utils/metrics/aupr.py → src/anomalib/utils/metrics/aupr.py
diff --git a/anomalib/utils/metrics/aupro.py → src/anomalib/utils/metrics/aupro.py b/anomalib/utils/metrics/aupro.py → src/anomalib/utils/metrics/aupro.py
diff --git a/anomalib/utils/metrics/auroc.py → src/anomalib/utils/metrics/auroc.py b/anomalib/utils/metrics/auroc.py → src/anomalib/utils/metrics/auroc.py
diff --git a/anomalib/utils/metrics/collection.py → src/anomalib/utils/metrics/collection.py b/anomalib/utils/metrics/collection.py → src/anomalib/utils/metrics/collection.py
diff --git a/anomalib/utils/metrics/min_max.py → src/anomalib/utils/metrics/min_max.py b/anomalib/utils/metrics/min_max.py → src/anomalib/utils/metrics/min_max.py
diff --git a/anomalib/utils/metrics/optimal_f1.py → src/anomalib/utils/metrics/optimal_f1.py b/anomalib/utils/metrics/optimal_f1.py → src/anomalib/utils/metrics/optimal_f1.py
diff --git a/anomalib/utils/metrics/plotting_utils.py → src/anomalib/utils/metrics/plotting_utils.py b/anomalib/utils/metrics/plotting_utils.py → src/anomalib/utils/metrics/plotting_utils.py
diff --git a/anomalib/utils/metrics/pro.py → src/anomalib/utils/metrics/pro.py b/anomalib/utils/metrics/pro.py → src/anomalib/utils/metrics/pro.py
diff --git a/anomalib/utils/sweep/__init__.py → src/anomalib/utils/sweep/__init__.py b/anomalib/utils/sweep/__init__.py → src/anomalib/utils/sweep/__init__.py
diff --git a/anomalib/utils/sweep/config.py → src/anomalib/utils/sweep/config.py b/anomalib/utils/sweep/config.py → src/anomalib/utils/sweep/config.py
diff --git a/anomalib/utils/sweep/helpers/__init__.py → src/anomalib/utils/sweep/helpers/__init__.py b/anomalib/utils/sweep/helpers/__init__.py → src/anomalib/utils/sweep/helpers/__init__.py
diff --git a/anomalib/utils/sweep/helpers/callbacks.py → ...anomalib/utils/sweep/helpers/callbacks.py b/anomalib/utils/sweep/helpers/callbacks.py → ...anomalib/utils/sweep/helpers/callbacks.py
diff --git a/anomalib/utils/sweep/helpers/inference.py → ...anomalib/utils/sweep/helpers/inference.py b/anomalib/utils/sweep/helpers/inference.py → ...anomalib/utils/sweep/helpers/inference.py
diff --git a/tests/pre_merge/utils/callbacks/normalization_callback/test_normalization_callback.py b/tests/pre_merge/utils/callbacks/normalization_callback/test_normalization_callback.py
@@ -20,7 +20,7 @@ def run_train_test(config):
 
 @TestDataset(num_train=200, num_test=30, path=get_dataset_path(), seed=42)
 def test_normalizer(path=get_dataset_path(), category="shapes"):
-    config = get_configurable_parameters(config_path="anomalib/models/padim/config.yaml")
+    config = get_configurable_parameters(config_path="src/anomalib/models/padim/config.yaml")
     config.dataset.path = path
     config.dataset.category = category
     config.metrics.threshold.method = "adaptive"

diff --git a/tests/pre_merge/utils/metrics/test_adaptive_threshold.py b/tests/pre_merge/utils/metrics/test_adaptive_threshold.py
@@ -37,7 +37,7 @@ def test_manual_threshold():
     Test if the manual threshold gets used in the F1 score computation when
     adaptive thresholding is disabled and no normalization is used.
     """
-    config = get_test_configurable_parameters(config_path="anomalib/models/padim/config.yaml")
+    config = get_test_configurable_parameters(config_path="src/anomalib/models/padim/config.yaml")
 
     config.dataset.num_workers = 0
     config.model.normalization_method = "none"

diff --git a/tox.ini b/tox.ini
@@ -23,6 +23,7 @@ passenv = ftp_proxy
 deps =
     coverage[toml]
     pytest
+    pytest-cov
     flaky
     nbmake
     -r{toxinidir}/requirements/base.txt
@@ -31,15 +32,17 @@ deps =
 
 commands =
     ; 1. Run Coverage First.
-    coverage erase
-    coverage run --include=anomalib/* -m pytest {posargs:tests/pre_merge/} -ra --showlocals
-    ; https://github.com/openvinotoolkit/anomalib/issues/94
-    coverage report -m --fail-under=85
-    coverage xml -o {toxworkdir}/coverage.xml
+    pytest tests/pre_merge \
+        --cov=anomalib \
+        --cov-report=xml:{toxworkdir}/coverage.xml \
+        --cov-fail-under=8.5 \
+        {posargs}
 
     ; 2. Test Jupyter Notebooks.
-    ; TODO: CVS-102917 - Add tests for 300_benchmarking and 400_openvino
-    pytest --nbmake notebooks --ignore=notebooks/300_benchmarking --ignore=notebooks/400_openvino --ignore=notebooks/500_use_cases/501_dobot
+    pytest --nbmake notebooks \
+        --ignore=notebooks/300_benchmarking \
+        --ignore=notebooks/400_openvino \
+        --ignore=notebooks/500_use_cases/501_dobot
 
 [testenv:nightly]
 basepython = python3
@@ -57,7 +60,7 @@ deps =
     -r{toxinidir}/requirements/extras.txt
 commands =
     coverage erase
-    coverage run --include=anomalib/* -m pytest tests/nightly/ -ra --showlocals
+    coverage run --include=anomalib/* -m pytest tests/nightly/
     coverage report -m --fail-under=33
     coverage xml -o {toxworkdir}/coverage.xml