Merge pull request #192 from joonan-lab/develop-103

Update documents

docs/faq/faq.rst

@@ -12,9 +12,9 @@ For easy installation of VEP, we provide the following commands for installation
 
 For LOFTEE plugin, the installation location for cpanm, perl, and VEP should be the same. For example, for conda, all tools should be located under the same conda environment for VEP to locate other tools.
 
-To install VEP version 110, users can use the following command. If users want to install other versions, users can modify the number `110` to their desired specific version.
+To install VEP version 110, users can use the following command. If users want to install other versions, users can modify the number **110** to their desired specific version.
 
-(The provided commands are referenced from `VEP document <https://asia.ensembl.org/info/docs/tools/vep/script/vep_download.html>`.)
+(The provided commands are referenced from `VEP document <https://asia.ensembl.org/info/docs/tools/vep/script/vep_download.html>`_.)
 
 .. code-block:: solidity
   

docs/index.rst

@@ -13,7 +13,7 @@ Here are the reference papers:
 
 * `An analytical framework for whole genome sequence association studies and its implications for autism spectrum disorder <https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961723/>`_ (Werling et al., 2018)
 * `Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder <https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6432922/>`_ (An et al., 2018)
-* `CWAS-Plus: Estimating category-wide association of rare noncoding variation from whole-genome sequencing data with cell-type-specific functional data <https://www.medrxiv.org/content/10.1101/2024.04.15.24305828v1>` (Kim et al., in press)
+* `CWAS-Plus: Estimating category-wide association of rare noncoding variation from whole-genome sequencing data with cell-type-specific functional data <https://www.medrxiv.org/content/10.1101/2024.04.15.24305828v1>`_ (Kim et al., in press)
 
 
 CWAS-Plus workflow