Please check our website at https://compbiomed.github.io/TBSignatureProfiler-docs/.
The TBSignatureProfiler is an R package that allows researchers to easily profile RNA-seq data using signatures for TB progression, TB disease, and other TB disease states, using common signature profiling tools including ASSIGN, GSVA, and ssGSEA.
The TBSignatureProfiler requires R Version 4.1 and Bioconductor 3.14.
- Install the development version of the package from Github:
if (!requireNamespace("devtools", quietly=TRUE))
install.packages("devtools")
devtools::install_github("compbiomed/TBSignatureProfiler")- Install the release version of the package from Bioconductor:
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("TBSignatureProfiler")