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149 Open 120 Closed
149 Open 120 Closed
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Issues list

Error: AttributeError: 'NoneType' object has no attribute 'level_num'
#297 opened Jan 22, 2025 by marco315176
1
bracken-build does not recognize kraken2 db files though they exist
#295 opened Dec 13, 2024 by balags1
1
The blank value problem in the integration of multiple samples
#294 opened Dec 3, 2024 by molinfzlvvv
Bracken not redistributing reads as expected?
#293 opened Dec 2, 2024 by JessF298
flag to include unclassified reads
#292 opened Nov 29, 2024 by alexandrabast
Update version number in bracken
#291 opened Nov 25, 2024 by JonathanAbrahams1337
Change Bracken help text for default threshold
#290 opened Nov 21, 2024 by JonathanAbrahams1337
line 179: /usr/bin/kraken2: Argument list too long
#289 opened Nov 19, 2024 by jd-apha
Bracken installation
#288 opened Nov 12, 2024 by shwetha141
1
Latest updates not available via conda?
#287 opened Oct 30, 2024 by sterrettJD
1
conda bracken error, help me plz........
#285 opened Oct 22, 2024 by DaHye0205
5
IndexError: string index out of range for clade Bacteria with empty level
#284 opened Oct 20, 2024 by fluhus
3
Bracken+Krakenuniq- ERR-line 225: 1238747 Segmentation fault (core dumped)
#283 opened Oct 18, 2024 by BhawnaY16
Combine bracken or reports across all 7 taxonomic levels
#282 opened Oct 15, 2024 by Christaline-George
Bracken failed to execute after a period of installation and also few execution
#281 opened Sep 20, 2024 by cypheroJ
Ability to do sub-species level abundance calling?
#280 opened Sep 18, 2024 by jgrembi
KMER_LEN and READ_LEN for ONT build?
#279 opened Sep 9, 2024 by rjsorr
bracken-build: line 231: syntax error: unexpected end of file error
#278 opened Aug 29, 2024 by HUANGjiadai
9
new_est_reads between samples
#277 opened Jul 24, 2024 by liuxiangping123
1
overestimation of unexpected pathogens by bracken
#276 opened Jul 19, 2024 by dmyrkana
Different number of genus identified in genus and species level
#274 opened Jul 18, 2024 by royparamita
1
bracken error : databaseeportsmers.kmer_distrib does not exist
#273 opened Jul 17, 2024 by sm-sudo
2
change of reads number
#271 opened Jul 9, 2024 by suiyuano
1
Using Bracken for metatranscriptomic analysis
#269 opened Jun 26, 2024 by Somebodyatthdoor
Include --report-minimizer-data in Bracken output?
#268 opened Jun 26, 2024 by DntBScrdDv
1
ProTip! Exclude everything labeled bug with -label:bug.