fixes

jeffersoncasimir · Jul 14, 2021 · 3216891 · 3216891
1 parent b672912
commit 3216891
Show file tree

Hide file tree

Showing 28 changed files with 4,058 additions and 5 deletions.
diff --git a/build.ps1 b/build.ps1
@@ -8,9 +8,42 @@ pyinstaller --paths=python python/eeg2bids.py -F `
 --add-data 'python/libs/bids_validator/rules/session_level_rules.json;./bids_validator/rules' `
 --add-data 'python/libs/bids_validator/rules/subject_level_rules.json;./bids_validator/rules' `
 --add-data 'python/libs/bids_validator/tsv/non_custom_columns.json;./bids_validator/tsv' `
+--add-data 'python/libs/mne/channels/data/montages/EGI_256.csd;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/GSN-HydroCel-128.sfp;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/GSN-HydroCel-129.sfp;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/GSN-HydroCel-256.sfp;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/GSN-HydroCel-257.sfp;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/GSN-HydroCel-32.sfp;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/GSN-HydroCel-64_1.0.sfp;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/GSN-HydroCel-65_1.0.sfp;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/artinis-brite23.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/artinis-octamon.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/biosemi128.txt;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/biosemi16.txt;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/biosemi160.txt;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/biosemi256.txt;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/biosemi32.txt;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/biosemi64.txt;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/easycap-M1.txt;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/easycap-M10.txt;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/mgh60.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/mgh70.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/standard_1005.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/standard_1020.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/standard_alphabetic.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/standard_postfixed.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/standard_prefixed.elc;./mne/channels/data/montages' `
+--add-data 'python/libs/mne/channels/data/montages/standard_primed.elc;./mne/channels/data/montages' `
 --hidden-import=eventlet.hubs.epolls `
 --hidden-import=eventlet.hubs.kqueue `
 --hidden-import=eventlet.hubs.selects `
+--hidden-import=eventlet.tpool `
+--hidden-import=eventlet.event `
+--hidden-import=eventlet.greenio `
+--hidden-import=eventlet.greenthread `
+--hidden-import=eventlet.patcher `
+--hidden-import=eventlet.timeout `
+--hidden-import=eventlet.six `
 --hidden-import=dns --hidden-import=dns.dnssec --hidden-import=dns.e164 `
 --hidden-import=dns.hash --hidden-import=dns.namedict `
 --hidden-import=dns.tsigkeyring --hidden-import=dns.update `

diff --git a/python/libs/iEEG.py b/python/libs/iEEG.py
@@ -256,13 +256,17 @@ def to_bids(self,
                 bids_basename = BIDSPath(subject=subject, task=task, root=bids_root, acquisition=ch_type, run=run)
                 bids_basename.update(session=session)
 
-                write_raw_bids(raw, bids_basename, overwrite=False, verbose=False)
-                with open(bids_basename, 'r+b') as f:
-                    f.seek(8)  # id_info field starts 8 bytes in
-                    f.write(bytes("X X X X".ljust(80), 'ascii'))
+                try:
+                    write_raw_bids(raw, bids_basename, anonymize=dict(daysback=33630), overwrite=False, verbose=False)
+                    with open(bids_basename, 'r+b') as f:
+                        f.seek(8)  # id_info field starts 8 bytes in
+                        f.write(bytes("X X X X".ljust(80), 'ascii'))
+                except Exception as ex:
+                    print('Exception ex:')
+                    print(ex)
 
                 print('finished')
-                
+
                 return bids_basename.basename
 
             except PermissionError as ex: