Bump mypy, ruff versions

- ruff v1.9.0 → v1.14.1.
  - Drop custom hook entry that uses PRE_COMMIT_MYPY_VENV.
  - Use config suggested at python/mypy#13916.
- ruff v0.3.4 → v0.9.1
  - Reformat 4 files.
  - Temporarily exclude *.ipynb files covered by new version.

.pre-commit-config.yaml

@@ -1,27 +1,20 @@
 repos:
-- repo: local
+- repo: https://github.com/pre-commit/mirrors-mypy
+  rev: v1.14.1
   hooks:
   - id: mypy
-    name: mypy
-    always_run: true
-    require_serial: true
     pass_filenames: false
-
-    language: python
-    entry: bash -c ". ${PRE_COMMIT_MYPY_VENV:-/dev/null}/bin/activate 2>/dev/null; mypy $0 $@"
     additional_dependencies:
-    - mypy >= 1.9.0
     - genno
     - GitPython
     - nbclient
     - pandas-stubs
     - pytest
-    - sphinx
+    - Sphinx
     - werkzeug
     - xarray
-    args: ["."]
 - repo: https://github.com/astral-sh/ruff-pre-commit
-  rev: v0.3.4
+  rev: v0.9.1
   hooks:
   - id: ruff
   - id: ruff-format

ixmp/backend/jdbc.py

@@ -170,7 +170,7 @@ def _domain_enum(domain):
         return domain_enum.valueOf(domain.upper())
     except java.IllegalArgumentException:
         domains = ", ".join([d.name().lower() for d in domain_enum.values()])
-        raise ValueError(f"No such domain: {domain}, " f"existing domains: {domains}")
+        raise ValueError(f"No such domain: {domain}, existing domains: {domains}")
 
 
 def _unwrap(v):
@@ -886,8 +886,7 @@ def clone(
         # Raise exceptions for limitations of JDBCBackend
         if not isinstance(platform_dest._backend, self.__class__):
             raise NotImplementedError(  # pragma: no cover
-                f"Clone between {self.__class__} and"
-                f"{platform_dest._backend.__class__}"
+                f"Clone between {self.__class__} and{platform_dest._backend.__class__}"
             )
         elif platform_dest._backend is not self:
             package = s.__class__.__module__.split(".")[0]

ixmp/cli.py

@@ -91,7 +91,7 @@ def report(context, config, key):
 
     if not context:
         raise click.UsageError(
-            "give either --url, --platform or --dbprops " "before command report"
+            "give either --url, --platform or --dbprops before command report"
         )
 
     # Instantiate the Reporter with the Scenario loaded by main()
@@ -227,8 +227,7 @@ def import_group(context):
     """
     if not context or "scen" not in context:
         raise click.UsageError(
-            "give --url, or --platform, --model, and "
-            "--scenario, before command import"
+            "give --url, or --platform, --model, and --scenario, before command import"
         )
 
 
@@ -407,7 +406,7 @@ def list_scenarios(context, **kwargs):
 
     if not context:
         raise click.UsageError(
-            "give either --url, --platform or --dbprops " "before command list"
+            "give either --url, --platform or --dbprops before command list"
         )
 
     print(

ixmp/tests/backend/test_jdbc.py

@@ -373,8 +373,7 @@ def test_verbose_exception(test_mp, exception_verbose_true):
 
     exc_msg = exc_info.value.args[0]
     assert (
-        "There exists no Scenario 'foo|bar' "
-        "(version: -1)  in the database!" in exc_msg
+        "There exists no Scenario 'foo|bar' (version: -1)  in the database!" in exc_msg
     )
     assert "at.ac.iiasa.ixmp.database.DbDAO.getRunId" in exc_msg
     assert "at.ac.iiasa.ixmp.Platform.getScenario" in exc_msg
@@ -595,7 +594,7 @@ def test_reload_cycle(
         mp = ixmp.Platform(**platform_args)
 
         # Load existing Scenario
-        s0 = ixmp.Scenario(mp, model="foo", scenario=f"bar {i-1}", version=1)
+        s0 = ixmp.Scenario(mp, model="foo", scenario=f"bar {i - 1}", version=1)
 
         memory_usage(f"pass {i} -- platform instantiated")
 

ixmp/tests/core/test_scenario.py

@@ -137,7 +137,7 @@ def test_init_set(self, scen):
         # Add set on a locked scenario
         with pytest.raises(
             RuntimeError,
-            match="This Scenario cannot be edited" ", do a checkout first!",
+            match="This Scenario cannot be edited, do a checkout first!",
         ):
             scen.init_set("foo")
 
@@ -399,7 +399,7 @@ def test_excel_io(self, scen, scen_empty, tmp_path, caplog):
 
         # With init_items=False, can't be read into an empty Scenario.
         # Exception raised is the first index set, alphabetically
-        with pytest.raises(ValueError, match="no set 'i'; " "try init_items=True"):
+        with pytest.raises(ValueError, match="no set 'i'; try init_items=True"):
             scen_empty.read_excel(tmp_path)
 
         # File can be read with init_items=True
@@ -441,7 +441,7 @@ def test_excel_io(self, scen, scen_empty, tmp_path, caplog):
 
         # Fails with add_units=False
         with pytest.raises(
-            ValueError, match="The unit 'pounds' does not exist" " in the database!"
+            ValueError, match="The unit 'pounds' does not exist in the database!"
         ):
             s.read_excel(tmp_path, init_items=True)
 
@@ -623,7 +623,7 @@ def test_set(scen_empty) -> None:
         scen.add_set("i", ["i9", "extra"], ["i9 comment"])
     # Missing element in the index set
     with pytest.raises(
-        ValueError, match="The index set 'i' does not have an " "element 'bar'!"
+        ValueError, match="The index set 'i' does not have an element 'bar'!"
     ):
         scen.add_set("foo", "bar")
 

pyproject.toml

@@ -82,8 +82,9 @@ exclude_also = [
 omit = ["ixmp/util/sphinx_linkcode_github.py"]
 
 [tool.mypy]
-exclude = [
-  "build/",
+files = [
+  "doc",
+  "ixmp",
 ]
 
 [[tool.mypy.overrides]]
@@ -111,6 +112,10 @@ markers = [
 ]
 tmp_path_retention_policy = "none"
 
+[tool.ruff]
+# TEMPORARY Exclude tutorial files
+extend-exclude = ["*.ipynb"]
+
 [tool.ruff.lint]
 select = ["C9", "E", "F", "I", "W"]
 # FIXME the following exceed this limit