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@hmgu-itg

Institute of Translational Genomics

Based at the Helmholtz Zentrum in Munich, our Institute leverages big data in genetics and genomics for medically important human traits.

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  1. VCF-liftover VCF-liftover Public

    Liftover VCF files

    Shell 17 8

  2. burden_testing burden_testing Public

    A collection of scripts to run variant aggregation tests from whole-genome sequencing data.

    Shell 7 4

  3. peakplotter peakplotter Public

    A tool to find and annotate signals in next-generation association studies

    Python 6 3

  4. plotburden plotburden Public

    Interactive tool to visualise burdens of rare variants

    HTML 5 1

  5. man_qq_annotate man_qq_annotate Public

    Creates Manhattan and QQ plots with annotated peaks.

    R 4 1

  6. VolosSummerSchool VolosSummerSchool Public

    Workshop and course materials for the annual Volos Summer School

    Jupyter Notebook 8 1

Repositories

Showing 10 of 48 repositories
  • imputationserver Public Forked from genepi/imputationserver

    Helmholtz Munich Imputation Server: A web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

    hmgu-itg/imputationserver’s past year of commit activity
    Java 1 AGPL-3.0 44 0 0 Updated Feb 23, 2025
  • cloudgene3 Public Forked from genepi/cloudgene3

    A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.

    hmgu-itg/cloudgene3’s past year of commit activity
    Java 0 MIT 4 0 0 Updated Feb 20, 2025
  • imputationserver-doc Public

    Munich Imputation Server documentation using MkDocs

    hmgu-itg/imputationserver-doc’s past year of commit activity
    0 1 0 1 Updated Feb 12, 2025
  • cloudgene Public Forked from genepi/cloudgene

    A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

    hmgu-itg/cloudgene’s past year of commit activity
    Java 0 AGPL-3.0 19 0 0 Updated Feb 9, 2025
  • general_purpose_scripts Public

    General purpose scripts

    hmgu-itg/general_purpose_scripts’s past year of commit activity
    Shell 1 0 0 0 Updated Feb 6, 2025
  • hmgu-itg/meta-analysis-burden-pipeline’s past year of commit activity
    R 0 0 0 0 Updated Feb 3, 2025
  • hmgu-itg/technical-questions’s past year of commit activity
    0 1 0 0 Updated Jan 29, 2025
  • imputationserver2 Public Forked from genepi/imputationserver2

    Nextflow based version of the imputationserver

    hmgu-itg/imputationserver2’s past year of commit activity
    Nextflow 0 MIT 7 0 0 Updated Jan 16, 2025
  • hmgu-itg/parallel-single-point-analysis-pipeline’s past year of commit activity
    Python 0 0 0 0 Updated Dec 19, 2024
  • hmgu-itg/single-point-analysis-pipeline’s past year of commit activity
    Python 1 1 0 0 Updated Dec 17, 2024

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