Pre-release 20221122-103412

Pre-release date: 2022-11-22 10:34:12 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221122-103412.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@1e9aaed

Pre-release 20221121-134456

Pre-release date: 2022-11-21 13:44:56 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221121-134456.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@4a242a8

Pre-release 20221121-125752

Pre-release date: 2022-11-21 12:57:52 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221121-125752.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@4a242a8

Pre-release 20221117-132847

Pre-release date: 2022-11-17 13:28:47 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221117-132847.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@a71df9d

Pre-release 20221116-174534

Pre-release date: 2022-11-16 17:45:34 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221116-174534.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@a71df9d

COVID-DRDB 20221116

Release date 2022-11-16

Changes since previous release (20221110):

• Resolve #200, add RDV susceptibility data from Gandhi22 (b4bdb94, by Philip Tzou)
• Fix Martinot22 (#472), a baseline isolate must be specified (a963c70, by Philip Tzou)
• add Kaku22 - 10.1101/2022.09.21.508922, resolve #634 (491d400, by Kaiming Tao)
• Add RdRP:P323L to ignored mutations (afc3333, by Philip Tzou)
• update Pommeret21 - 10.1016/j.annonc.2021.07.015, resolve #148 (7cb73ba, by Kaiming Tao)
• update #141, use Figure 4 (e5a648c, by Kaiming Tao)
• update #652 (0457323, by Kaiming Tao)
• update #712 (95a41c9, by Kaiming Tao)
• Add gene column to compound_binding_pockets (972d41d, by Philip Tzou)
• Add compound_binding_pockets table (dfbf5cb, by Philip Tzou)
• Merge NTV/r (PAXlovid) with NTV (f8e6b23, by Philip Tzou)
• Add prevalence from SPond Lab (9bcf521, by Philip Tzou)
• Add Heyer22 (10.1016/j.xcrm.2022.100735), RDV in-vivo selection data (72e9b6b, by Philip Tzou)
• Add Hogan22 (10.1093/cid/ciac769), RDV in-vivo selection data (67aa9a7, by Philip Tzou)
• Add RdRP in-vitro selection data (0f071d0, by Philip Tzou)
• add Ueno, 10.1016/j.antiviral.2022.105297, resolve #245 (285d86d, by Kaiming)
• add 10.46234/ccdcw2021.163, resolve #223 (2bfcbf5, by Kaiming)
• update Bowen22 - 10.1126/science.abq0203, resolve #343 (3ca3600, by Kaiming)
• resolve #680 (b38c13c, by Kaiming)
• fix #706 (2a8fd2b, by Kaiming)
• Add 3CL invitro selection data (c79b2b4, by Philip Tzou)
• add Kilker - 10.2807/1560-7917.ES.2022.27.30.2200559 #701 (ac5dc3e, by Kaiming Tao)
• Add Pitts22 (10.1128/aac.00222-22), RDV susceptibility data (c6e3844, by Philip Tzou)

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221116.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@eca0da4

Pre-release 20221116-130715

Pre-release date: 2022-11-16 13:07:15 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221116-130715.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@1e17cc7

Pre-release 20221116-123242

Pre-release date: 2022-11-16 12:32:42 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221116-123242.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@1e17cc7

Pre-release 20221116-105356

Pre-release date: 2022-11-16 10:53:56 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221116-105356.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@1e17cc7

Pre-release 20221115-184821

Pre-release date: 2022-11-15 18:48:21 PST

Usage of the .db files:

The .db files are SQLite3 databases. You can simply use this command to open them (if SQLite3 is installed):

sqlite3 covid-drdb-20221115-184821.db

Once the SQLite shell prompts, type .tables to list all tables.

You can also use any SQLite viewer to open the database, e.g.:

• https://inloop.github.io/sqlite-viewer/
• https://sqlitebrowser.org/

Built with hivdb/covid-drdb@1e17cc7