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  1. ecGEM_Halo_GEM ecGEM_Halo_GEM Public

    Additional code to supplement Chalmers model

    Jupyter Notebook

  2. eukaryote_neural_net eukaryote_neural_net Public

    ML code / models use for modeling eukaryote genome. Determine enhancers, introns, promoter strength, etc

    Python

  3. HK_Catboost_clusters HK_Catboost_clusters Public

    Histidine Kinase sensory mmseq2 clustering analysis and classification using cat boost machine learning. Collaboration with Kbase

    Jupyter Notebook

  4. MarRef_DeepMicrobes MarRef_DeepMicrobes Public

    Retraining of DeepMicrobes using the MarRef dataset

    Jupyter Notebook 1