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[deps] record expected hashes with pinned requirements - #15901
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Check name Status Explanation Title check The title clearly summarizes the primary change: recording expected hashes for pinned requirements. Linked Issues check Check skipped because no linked issues were found for this pull request. Out of Scope Changes check Check skipped because no linked issues were found for this pull request.
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Actionable comments posted: 3
- 🪄 Fix comments: Fix CodeRabbit comments on this PR
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Inline comments:
Review comments at @check_pip_requirements.sh:
- Around line 21-22: Update the pinned-requirements validation around the sed
normalization commands to require at least one valid hash for every pinned
requirement, while still allowing newly published artifact hashes to differ
during comparison. Ensure files with all hashes removed fail the check instead
of being treated as equivalent version-only requirements.
Review comments at @ci/Dockerfile.ci-utils:
- Line 11: Update the hail-pip-install dependency installation flow so
installing twine and Jinja2 cannot replace the previously pinned, hash-checked
packages. Reuse the existing pinned versions as pip constraints for this call,
or install these tools from a hashed lockfile while preserving dependency
integrity.
Review comments at @docker/hailgenetics/hail/Dockerfile:
- Line 14: Update the hail-pip-install invocation for scikit-learn and ipython
so it uses the versions pinned by requirements.txt, or resolves these extras
through the hashed requirements mechanism; do not allow the extras installation
to replace pinned dependencies with unverified versions.
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📒 Files selected for processing: 14
batch/pinned-requirements.txtcheck_pip_requirements.shci/Dockerfile.ci-utilsci/pinned-requirements.txtdev-docs/pip-dependencies.mddocker/hail-ubuntu/Dockerfiledocker/hailgenetics/hail/Dockerfilegear/pinned-requirements.txtgenerate-pip-lockfile.shhail/Makefilehail/python/dev/pinned-requirements.txthail/python/hailtop/pinned-requirements.txthail/python/pinned-requirements.txtweb_common/pinned-requirements.txt
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cjllanwarne
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chrisvittal
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chrisvittal
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Seems fine. The additions really are just generated files. Other changes are simple and good.
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It's excellent to pin to hashes. Consider adding a cooldown of, say, 7 days 3 days, to avoid pinning new malicious library versions.
I tried --exclude-newer P7D in your two scripts, and it does work but downgrades some libraries.
Edit: Reduced recommended cooldown to 3 days.
TomConner
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TomConner
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I'm approving this - it's your choice what cooldown policy to set. Whatever default you choose, you will probably need to make exceptions occasionally.
WIth a cooldown, you allow some time for malicious updates to be identified before you take them. With a short (or 0) cooldown, you speed up upgrades and security fixes.
cjllanwarne
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Change Description
When storing pinned requirement versions, also store their hashes.
Includes an update to our process:
ci-utilsandhailgenetics/hailwere previously installing unpinned packages. In order to bring them into the "check the hashes" umbrella, we also need to pin their dependencies. So two new dependencies files are added and compiled against python 3.12.(It was a close call whether to bother changing those two images. In the end, because
ci-utilsis heavily used in the build process, feeling good about what it's downloading and installing felt worth validating. And then hailgenetics/hail was the odd-one-out and giving it a dependencies lock wasn't tremendously difficult, so it got included too).Security Assessment
Impact Rating
Impact Description
Reduce risks of a supply chain interference by letting us check the integrity of the packages we're installing (instead of relying on TLS being secure and nothing upstream having changed)
Appsec Review