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JMB_review2019

analyses and figures Data exploration for the environmental stress response in archaea

Created: 2018-08-20 Author: Rylee K. Hackley [email protected]

Files

  • code:
    • contains all scripts and analysis, including access and download of raw data files
  • data:
    • contains COG annotations of Hbt. salinarum and S. cerevisiae genomes, GO annotations, protein acc to gene locus name conversion files, and COG category descriptions.
    • Details and scripts generating the conversion files areis avialable upon request
  • output:
    • contains the results of data wranging, gene-by-gene clustering, COG enrichment, and all figures

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2018-08-20 created 2019-03-13 updated to reflect folder contents, created github repo 2019-07-11 updated to reflect responses to reviewers

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