Remove p2psimpy:

.gitignore

@@ -0,0 +1,156 @@
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+.python-version
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintainted in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+**/.DS_Store
+

01_Intro_To_Distributed_Systems.ipynb

@@ -60,13 +60,6 @@
     "This class can be used as generators of parameters, saved and loaded as a [YAML](https://en.wikipedia.org/wiki/YAML) file."
    ]
   },
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
-    "  "
-   ]
-  },
   {
    "cell_type": "markdown",
    "metadata": {},
@@ -243,7 +236,9 @@
     " 2. Get 100 samples from the configuration with latencies\n",
     " \n",
     " 3. Visualize in a grid of histograms\n",
-    "\n"
+    "\n",
+    "\n",
+    "The visulations shows the latency matrix for our two locations: \n"
    ]
   },
   {
@@ -270,23 +265,13 @@
     "                    .rename(columns={'level_0':'from', 'level_1':'to', 0: 'value'})\n",
     "                    \n",
     "# 2. Get 100 samples\n",
-    "df = pd.concat(prepare(DistLocations.get()['latencies']) for _ in range(100))\n",
+    "df = pd.concat([prepare(DistLocations.get()['latencies']) for _ in range(100)], ignore_index=True)\n",
+    "\n",
+    "#df \n",
     "\n",
     "# 3. Visualize in a grid of histograms\n",
     "g = sns.FacetGrid(df, col='to', row='from', height=4, aspect=1)\n",
-    "g = g.map(sns.distplot, 'value')\n"
-   ]
-  },
-  {
-   "cell_type": "raw",
-   "metadata": {},
-   "source": []
-  },
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
-    "The visulations shows the latency matrix for our two locations. "
+    "g = g.map(sns.histplot, 'value')\n"
    ]
   },
   {
@@ -529,10 +514,10 @@
    },
    "outputs": [],
    "source": [
-    "from p2psimpy.simulation import BaseSimulation\n",
+    "from p2psimpy.simulation import Simulation\n",
     "\n",
     "# Create BaseSimulation with enabled logger and save in the logs directory. \n",
-    "sim = BaseSimulation(Locations, G, peer_types, enable_logger=True, logger_dir='logs')\n",
+    "sim = Simulation(Locations, G, peer_types, enable_logger=True, logger_dir='logs')\n",
     "\n",
     "# Let's run the simulation for 5 seconds\n",
     "sim.run(5_000)"
@@ -618,7 +603,7 @@
    },
    "outputs": [],
    "source": [
-    "sim = BaseSimulation(Locations, topology_specs, peer_types, logger_dir='logs2')\n",
+    "sim = Simulation(Locations, topology_specs, peer_types, logger_dir='logs2')\n",
     "\n",
     "# Let's run the simulation for 5 seconds\n",
     "sim.run(5_000)"
@@ -642,7 +627,7 @@
    },
    "outputs": [],
    "source": [
-    "G1 = sim.get_graph()\n",
+    "G1 = sim.current_topology()\n",
     "nx.draw_networkx(G1)"
    ]
   },
@@ -693,7 +678,7 @@
  "metadata": {
   "hide_input": false,
   "kernelspec": {
-   "display_name": "Python 3",
+   "display_name": "Python 3 (ipykernel)",
    "language": "python",
    "name": "python3"
   },
@@ -707,7 +692,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.8.5"
+   "version": "3.9.9"
   },
   "pycharm": {
    "stem_cell": {