typo in study for long chains

grasingerm · May 18, 2023 · 3f263e9 · 3f263e9
1 parent 7ad06e4
commit 3f263e9
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diff --git a/run/phases-big_2023-05-18.jl b/run/phases-big_2023-05-18.jl
@@ -39,7 +39,7 @@ pmap(case -> begin;
   outfile = joinpath(workdir, "$(prefix(case)).out");
   if !isfile(outfile)
     println("Running case: $case.");
-    command = `julia -O 3 mcmc_clustering_eap_chain.jl --chain-type cutoff --energy-type interacting -b $(case[:b]) --bend-mod $(case[:kappa]) --E0 $(case[:E0]) --K1 $(case[:K1]) --K2 $(case[:K2]) --kT $(case[:kT]) --Fz $(case[:Fz]) --Fx $(case[:Fx]) -n $(case[:n]) --num-steps 2000000 --burn-in 200000 -v 2 --prefix $(joinpath(workdir, prefix(case)))`;
+    command = `julia -O 3 mcmc_clustering_eap_chain.jl --chain-type dielectric --energy-type cutoff -b $(case[:b]) --bend-mod $(case[:kappa]) --E0 $(case[:E0]) --K1 $(case[:K1]) --K2 $(case[:K2]) --kT $(case[:kT]) --Fz $(case[:Fz]) --Fx $(case[:Fx]) -n $(case[:n]) --num-steps 2000000 --burn-in 200000 -v 2 --prefix $(joinpath(workdir, prefix(case)))`;
     output = read(command, String);
     write(outfile, output); 
   else

diff --git a/run/phases_2023-05-15b.jl b/run/phases_2023-05-15b.jl
@@ -0,0 +1,49 @@
+println("Hello world!");
+
+@everywhere using Printf;
+
+@show workdir = if length(ARGS) > 0
+  ARGS[1];
+else
+  ".";
+end
+
+@everywhere fmt(x) = @sprintf("%07d", round(Int, 1e3*x));
+@everywhere fmt_int(x) = @sprintf("%03d", x);
+
+@everywhere function prefix(case)
+  "E0-$(fmt(case[:E0]))_K1-$(fmt(case[:K1]))_K2-$(fmt(case[:K2]))_kT-$(fmt(case[:kT]))_Fz-$(fmt(case[:Fz]))_Fx-$(fmt(case[:Fx]))_n-$(fmt(case[:n]))_b-$(fmt(case[:b]))_kappa-$(fmt(case[:kappa]))";
+end
+
+cases = Any[];
+κs = [0.0];
+Ks = zip([1.0; 0.0], [0.0; 1.0], [2.0; 1.0], [1.0; 2.0]);
+E0s = vcat(0.05:0.05:1.0, 1.5:0.5:5.0, 10.0);
+ns = Int[40; 50];
+bs = [0.1; 0.25; 0.5; 1.0];
+kTs = [0.1; 1.0];
+Fs = zip([0.0; 1.0; 0.0; 1.0/sqrt(2.0)], [0.0; 0.0; 1.0; 1.0/sqrt(2.0)]);
+for b in bs, κ in κs, n in ns, Kvec in Ks, E0 in E0s, kT in kTs, F in Fs
+  K1, K2 = Kvec;
+  push!(cases, Dict(:E0 => E0, :K1 => K1, :K2 => K2,
+                    :kT => kT, :Fz => F[2], :kappa => κ,
+                    :Fx => F[1], :n => n, :b => b));
+end
+
+@info "total number of cases to run: $(length(cases))";
+
+mkpath(workdir);
+
+pmap(case -> begin;
+
+  outfile = joinpath(workdir, "$(prefix(case)).out");
+  if !isfile(outfile)
+    println("Running case: $case.");
+    command = `julia -O 3 mcmc_clustering_eap_chain.jl --chain-type dielectric --energy-type interacting -b $(case[:b]) --bend-mod $(case[:kappa]) --E0 $(case[:E0]) --K1 $(case[:K1]) --K2 $(case[:K2]) --kT $(case[:kT]) --Fz $(case[:Fz]) --Fx $(case[:Fx]) -n $(case[:n]) --num-steps 2000000 --burn-in 200000 -v 2 --prefix $(joinpath(workdir, prefix(case)))`;
+    output = read(command, String);
+    write(outfile, output); 
+  else
+    println("Case: $case has already been run.");
+  end
+
+end, cases);