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fls-bioinformatics-core / auto_process_ngs Public

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Pull requests: fls-bioinformatics-core/auto_process_ngs

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Pull requests list

Add support for 'cellranger multi' in standalone QC utility 'run_qc.py' 10xGenomics enhancement Standalone QC WIP

Work in progress

#1059 opened Jun 4, 2025 by pjbriggs

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Update 'InferExperiment' class in 'qc/apps/rseqc' to handle unknown data type bugfix qc metrics WIP

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#1055 opened May 23, 2025 by pjbriggs

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Enable 'pipeliner' tasks to be forced to run even if preceeding tasks have failed new functionality pipeliner

#948 opened Feb 21, 2024 by pjbriggs

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