CaImAn island
Pre-release
Pre-release
CHECK THE NEW README FILE, UPDATED INSTALLATION INSTUCTIONS!!
New release that fixes a set of bugs and add new functionalities:
BUGS FIXED:
- MAC OS or LINUX processing getting stuck in multiprocessing or ipyparallel
- Online algorithm bug fixes
- Window support (a bit) more stable
New Features:
- installation with pip
- installation of demos examples movies and neural nets in a separate folder
- in place installation with pip
- CI for all the demos
- Use numpy's .tofile() method instead of managing files ourselves
- Added CNN for online calcium imaging analysis
- Online algorithm performance improved
- Online algorithm to run on Zebrafish data
- Code is more path aware
- Fixed tifffile compatibility
- Installation with packages from only conda-forge
- added support for non integere gSig
- enabling multiple new components per timestep in onacid
- Proofreading and killed deadcode
- more stable support for CNMF-E (endoscopic one photon data)