Initial commit

.Rbuildignore

@@ -6,3 +6,5 @@
 ^CONDUCT\.md$
 ^CONTRIBUTING\.md$
 analysis
+^Dockerfile$
+^\.travis\.yml$

.travis.yml

@@ -0,0 +1,28 @@
+# Build our Docker container and R pkg on Travis
+
+env:
+  global:
+  - REPO=$DOCKER_USER/mininglucc
+
+sudo: required
+
+warnings_are_errors: false
+
+language: generic
+
+services:
+  - docker
+
+before_install:
+    # create & run container using our dockerfile, i.e. compile pkg and render Rmd to Word doc
+  - docker build -t $REPO .
+
+# push our custom docker container to docker hub, env vars stored on travis-ci.org
+after_success:
+  - docker login -u $DOCKER_USER -p $DOCKER_PASS
+  - export REPO=$DOCKER_USER/mininglucc
+  - export TAG=`if [ "$TRAVIS_BRANCH" == "master" ]; then echo "latest"; else echo $TRAVIS_BRANCH ; fi`
+  - docker build -f Dockerfile -t $REPO:$COMMIT .
+  - docker tag $REPO:$COMMIT $REPO:$TAG
+  - docker tag $REPO:$COMMIT $REPO:travis-$TRAVIS_BUILD_NUMBER
+  - docker push $REPO

Dockerfile

@@ -0,0 +1,19 @@
+# get the base image, the rocker/verse has R, RStudio and pandoc
+FROM rocker/geospatial:4.0.1
+
+# required
+MAINTAINER Victor Maus <[email protected]>
+
+COPY . /mininglucc
+
+# go into the repo directory
+RUN . /etc/environment \
+  # Install linux depedendencies here
+  # e.g. need this for ggforce::geom_sina
+  && sudo apt-get update \
+  && sudo apt-get install libudunits2-dev -y \
+  # build this compendium package
+  && R -e "devtools::install('/mininglucc', dep=TRUE)" \
+  # render the manuscript into a docx, you'll need to edit this if you've
+  # customised the location and name of your main Rmd file
+  && R -e "rmarkdown::render('/mininglucc/analysis/paper/paper.Rmd')"