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@CAMI-challenge @bioconda @NCATS-Tangerine @RTXteam @NCATSTranslator @KoslickiLab @Penn-State-Microbiome-Center

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Popular repositories Loading

  1. MetaPalette MetaPalette Public

    Metagenomic profiling and phylogenetic distances via common kmers

    Python 42 5

  2. CMash CMash Public

    Fast and accurate set similarity estimation via containment min hash

    Python 42 9

  3. MinHashMetagenomics MinHashMetagenomics Public

    Fast approximation of similarity for sets of very different sizes

    Python 21 1

  4. EMDUnifrac EMDUnifrac Public

    Computation of Unifrac using Earth Movers Distance

    Python 8 5

  5. EMDeBruijn EMDeBruijn Public

    Earth mover's distance between de Bruijn graphs

    C++ 7

  6. ARK ARK Public

    Aggregation of kmers: preprocessing step for kmer-based metagenomics taxonomic profiling techniques

    Julia 4

162 contributions in the last year

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Activity overview

Loading A graph representing dkoslicki's contributions from April 14, 2024 to April 17, 2025. The contributions are 60% commits, 19% issues, 13% code review, 8% pull requests.

Contribution activity

April 2025

Created 1 repository
Reviewed 2 pull requests in 2 repositories
  • v1
    This contribution was made on Apr 10

Created an issue in RTXteam/RTX that received 5 comments

Uncaught expand errors:

For this query: { "edges": { "e0": { "predicates": [ "biolink:related_to" ], "subject": "n1", "object": "n2" }, "e1": { "predicates": [ "biolink:re…

5 comments
Opened 4 other issues in 2 repositories
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