Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add a digest for bed file after sorting #105

Open
donaldcampbelljr opened this issue Feb 21, 2025 · 1 comment
Open

Add a digest for bed file after sorting #105

donaldcampbelljr opened this issue Feb 21, 2025 · 1 comment
Assignees

Comments

@donaldcampbelljr
Copy link
Member

current digest that is calculated:

  • not sorted, only on the first three columns (the regions)

We want to add a digest that is for the first three columns after they've been sorted.

@donaldcampbelljr
Copy link
Member Author

  1. Digest for full file
  2. Digest for sorted bed file (first three cols of bedfile) -> Should this be the primary digest (primary way to identify the regions)?

What happens when you have two bed files that have the exact same regions?

There may be another open issue that the discusses the above point.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants