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Readme Update (#26)
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suzanmanasreh authored Apr 7, 2024
1 parent a2295b8 commit c38dd7d
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15 changes: 0 additions & 15 deletions common/ModTimeInt.F90
Original file line number Diff line number Diff line change
Expand Up @@ -288,21 +288,6 @@ subroutine TimeInt_Euler
! print *,"NO VEL"
call Compute_Rbc_Vel

! Log area expansion of cells every 100 ts
do irbc = 1, nrbc
rbc => rbcs(irbc)
if (rootWorld) then
if (lt == 1) then
rbc%starting_area = rbc%area
end if
if (modulo(lt, 100) == 0) then
areaExp = RBC_AreaExpansion(rbc)
write (*, '(A, I3, A, F10.5, A)') &
"area expansion of cell ", irbc, ": ", areaExp, "%"
end if
end if
end do

! Enforce no-slip condition on the wall
! print *,"NO NO SLIP"
call NoSlipWall
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2 changes: 1 addition & 1 deletion common/ModVelSolver.F90
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Expand Up @@ -620,7 +620,7 @@ subroutine Proj(cell, nlat, nlon, pp, qq, projpq)
end subroutine Proj

!**********************************************************************
! Global spherical harmonci transform
! Global spherical harmonic transform
!
! Arguments:
! v -- RBC surface velocities
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2 changes: 1 addition & 1 deletion examples/README.md
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Expand Up @@ -9,7 +9,7 @@ If you visualize the cells in the `case` directory, you will see 8 RBC's in a fi
## Case Different Cell Types
As of now, the different cell types we have are Leukocytes (aka WBC's) and sickle cells. We also have functions to create spheres and ellipsoids in `ModRbc.F90`.

In this example, celltype 1 corresponds to RBC's, celltype 2 corresponds to Leukocytes, and cell type 3 are sickle cells. To run a simulation with these cells, the timestep in `/case_diff_celltypes/Input/tube.in` needs to be adjusted to approximately ~0.00014 for sickle cells and ~0.0008 for leukocytes.
In this example, celltype 1 corresponds to RBC's, celltype 2 corresponds to Leukocytes, and cell type 3 are sickle cells. To run a simulation with these cells, the timestep in `/case_diff_celltypes/Input/tube.in` may need to be adjusted.

<p align="center">
<img src="../install/images/sicklecells.png" alt="sickle cell train" width="500"/>
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