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Docs overhaul#431

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dsweber2 wants to merge 61 commits intodevcmu-delphi/epipredict:devfrom

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Commits on Apr 10, 2025

• second readthrough of README.Rmd

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• make for manually clearing the caches

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• styler

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• missed an image in the man version

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• getting started page

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• fixing rebase problem

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• linewrapping

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• pushing only the dev docs

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• isn't building the readme

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• readme.rmd red/yellow -> blue/black

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• training on only the shown subset

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• autoplot new data

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• using new autoplot

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• getting started first draft

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• much more complete guts example, branching flatline fixes

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• fix for flatline discovered, rename guts

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• docs, styler

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• passing check & news

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• revising custom_epiworkflows

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• some more editing

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• finished custom_workflows, reviewing backtesting

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• backtesting rmd rewrite

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• dropping CAN backtesting example b/c ~no revisions

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• formatting

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• |> in backtesting, dropped a section in get started

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• landing page wording and get code running

  

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• landing page again but in Rmd

  

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• consistent naming, 7dav pull instead of manually

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• going back to just using the API call

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• recipes version, include epiprocess in the rmds

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• rebuild landing page

  

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• first half epipredict.Rmd

  

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• custom header, dropping arx_classifier smooth-qr

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• follow up on first half of epipredict.Rmd

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• avoid [link] parsing

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• reorganize reference page

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• postprocessing -> post-processing

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• lots of reference updates

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• forecast needs `...` as a generic

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• include climate, only calculate necessary days

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• Adding short blurb on cdc_flatline

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• extra details for symmetrize

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• epipredict.Rmd

  

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• backtesting.rmd

  

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• first half custom_epiworkflows.Rmd

  

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• second half custom_epiworkflows.Rmd

  

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• various requested changes

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• backtesting version un/faithful clarification

  

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• why comparing to final data

  

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• fixing backtest truth data plot

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• backtesting.rmd comment fixes

  

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• add alternate step names and say if optional/not

  

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• get_test_data help

  

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• get_test_data forecasts identical

  

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• clarify changing frosting with model

  

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• classifier chunk comments

  

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• model-specific layers

  

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Commits on Apr 15, 2025

• removing resolved todos

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Commits on May 2, 2025

• dan's simple suggestions

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• move pkgdown-watch, better climate ex, some wording

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• moving library, geo-pooling phrasing

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