October gene table update: v7

gene-table-update/build-input-for-importer/Readme.md

@@ -10,7 +10,7 @@ Scripts to build an input file, to be used by importer to build/update seedDB ge
 #### Step 1 - Download latest HGNC gene table
 
 ```
-wget ftp://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/tsv/hgnc_complete_set.txt
+wget https://storage.googleapis.com/public-download-files/hgnc/tsv/tsv/hgnc_complete_set.txt
 ```
 
 OR

gene-table-update/build-input-for-importer/build-gene-table-input.py

@@ -39,12 +39,12 @@ def format(self, record):
         return f'<div style="color:{message_color};"><strong style="color:{levelname_color};">[{levelname}]</strong>: {message}</div>'
 
 # Define paths for mappings and supplemental files
-TYPE_MAPPING_PATH = "/Users/bsatravada/Desktop/tets_hgnc_build/build-input-for-importer/mappings/type-mapping.txt"
-LOCATION_MAPPING_PATH = "/Users/bsatravada/Desktop/tets_hgnc_build/build-input-for-importer/mappings/location-mapping.txt"
-MAIN_SUPP_PATH = "/Users/bsatravada/Desktop/tets_hgnc_build/build-input-for-importer/supp-files/main-supp/complete-supp-main.txt"
-ALIAS_SUPP_PATH = "/Users/bsatravada/Desktop/tets_hgnc_build/build-input-for-importer/supp-files/alias-supp.txt"
-ENTREZ_ID_SUPP_PATH = "/Users/bsatravada/Desktop/tets_hgnc_build/build-input-for-importer/supp-files/entrez-id-supp.txt"
-LOCATION_SUPP_PATH = "/Users/bsatravada/Desktop/tets_hgnc_build/build-input-for-importer/supp-files/location-supp.txt"
+TYPE_MAPPING_PATH = "/Users/bsatravada/Desktop/HGNC_OCT_2025/build-input-for-importer/mappings/type-mapping.txt"
+LOCATION_MAPPING_PATH = "/Users/bsatravada/Desktop/HGNC_OCT_2025/build-input-for-importer/mappings/location-mapping.txt"
+MAIN_SUPP_PATH = "/Users/bsatravada/Desktop/HGNC_OCT_2025/build-input-for-importer/supp-files/main-supp/complete-supp-main.txt"
+ALIAS_SUPP_PATH = "/Users/bsatravada/Desktop/HGNC_OCT_2025/build-input-for-importer/supp-files/alias-supp.txt"
+ENTREZ_ID_SUPP_PATH = "/Users/bsatravada/Desktop/HGNC_OCT_2025/build-input-for-importer/supp-files/entrez-id-supp.txt"
+LOCATION_SUPP_PATH = "/Users/bsatravada/Desktop/HGNC_OCT_2025/build-input-for-importer/supp-files/location-supp.txt"
 
 gene_dict = {}