pedx

Integrating pedigree information into linked-read based haplotyping to phase SV's

Name	Name	Last commit message	Last commit date
Latest commit burgshrimps changed rephasing algorithm taking variant qualities into account Oct 15, 2019 ddc544d · Oct 15, 2019 History 25 Commits
PEDX_cluster.py	PEDX_cluster.py	added submethods integrate and cluster	Sep 15, 2019
PEDX_index.py	PEDX_index.py	changed rephasing algorithm taking variant qualities into account	Oct 15, 2019
PEDX_input_parsing.py	PEDX_input_parsing.py	added svcall and refined svhap	Sep 16, 2019
PEDX_integrate.py	PEDX_integrate.py	added submethods integrate and cluster	Sep 15, 2019
PEDX_rephase.py	PEDX_rephase.py	changed rephasing algorithm taking variant qualities into account	Oct 15, 2019
PEDX_svcall.py	PEDX_svcall.py	added svcall and refined svhap	Sep 16, 2019
PEDX_svhap.py	PEDX_svhap.py	add writing property to phasing stat file opening	Oct 1, 2019
README.md	README.md	modified README	Sep 8, 2019
pedx.py	pedx.py	chr to be included added	Sep 26, 2019

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