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Some files missing in mitochondria pipeline

Status: Open.

#1952 In broadinstitute/warp;

· yslee-genome4me opened on Sep 4, 2026

перестал работать WARP

Status: Open.

#1927 In broadinstitute/warp;

· dimasik2011-max opened on Aug 15, 2026

oracle

Status: Open.

#1901 In broadinstitute/warp;

· princess38827 opened on Jul 29, 2026

No reads passing filters for dragmap-aligned bams follow-up

Status: Open.

#1882 In broadinstitute/warp;

· xyy1093 opened on Jul 6, 2026

Add optional Picard CreateExtendedIlluminaManifest task to IlluminaGenotypingArray

Status: Open.

#1876 In broadinstitute/warp;

· sdslack opened on Jun 30, 2026

JointGenotyping_v1.7.2 vqsr_snp_filter_level and vqsr_indel_filter_level are incorrectly shown as optional

Status: Open.

#1870 In broadinstitute/warp;

· jedpe opened on Jun 24, 2026

Summary Documentation

Status: Open.

#1790 In broadinstitute/warp;

· anaellle opened on Feb 27, 2026

WARP Workflow "out of memory" issue on Terra

Status: Open.

#1677 In broadinstitute/warp;

· yxhan opened on Sep 23, 2025

parsing error in WGS single sample workflow

Status: Open.

#1538 In broadinstitute/warp;

· mmwheel opened on Mar 6, 2025

Using samtools sort instead of Picard WGS

Status: Open.

#1119 In broadinstitute/warp;

· ekiernan opened on Nov 8, 2023

Can't calculate duplicates from flag in BAM output of Optimus, Multiome, and Slideseq

Status: Open.

#1115 In broadinstitute/warp;

· ekiernan opened on Nov 2, 2023

BamProcessing.wdl, Float contamination = read_float(stdout())

Status: Open.

#1059 In broadinstitute/warp;

· ad2n15 opened on Aug 7, 2023