Revert "create split PDOs with pm team status"

This reverts commit 92e6314.
broadinstitute · Jan 29, 2025 · 184716d · 184716d
1 parent 92e6314
commit 184716d
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/seqr/management/commands/check_for_new_samples_from_pipeline.py b/seqr/management/commands/check_for_new_samples_from_pipeline.py
@@ -14,7 +14,7 @@
 from seqr.utils.search.add_data_utils import notify_search_data_loaded
 from seqr.utils.search.utils import parse_valid_variant_id
 from seqr.utils.search.hail_search_utils import hail_variant_multi_lookup, search_data_type
-from seqr.views.utils.airtable_utils import AirtableSession, LOADABLE_PDO_STATUSES, AVAILABLE_PDO_STATUS
+from seqr.views.utils.airtable_utils import AirtableSession, LOADABLE_PDO_STATUSES, AVAILABLE_PDO_STATUS, LOADING_PDO_STATUS
 from seqr.views.utils.dataset_utils import match_and_update_search_samples
 from seqr.views.utils.export_utils import write_multiple_files
 from seqr.views.utils.permissions_utils import is_internal_anvil_project, project_has_anvil
@@ -298,7 +298,7 @@ def _update_pdos(session, project_guid, sample_ids):
         # Create PDOs and then update Samples with new PDOs
         # Does not create PDOs with Samples directly as that would not remove Samples from old PDOs
         new_pdos = session.safe_create_records('PDO', [
-            {'PDO': pdo_name, **pdo, 'PDOStatus': 'PM team (Relatedness checks)'} for pdo_name, (_, pdo) in pdos_to_create.items()
+            {'PDO': pdo_name, **pdo, 'PDOStatus': LOADING_PDO_STATUS} for pdo_name, (_, pdo) in pdos_to_create.items()
         ])
         pdo_id_map = {pdos_to_create[record['fields']['PDO']][0]: record['id'] for record in new_pdos}
         for pdo_id, sample_record_ids in skipped_pdo_samples.items():

diff --git a/seqr/management/tests/check_for_new_samples_from_pipeline_tests.py b/seqr/management/tests/check_for_new_samples_from_pipeline_tests.py
@@ -774,7 +774,7 @@ def _assert_expected_airtable_calls(self):
         self.assertDictEqual(json.loads(create_pdos_request.body), {'records': [{'fields': {
             'PDO': 'PDO-1234_sr',
             'SeqrProjectURL': 'https://test-seqr.org/project/R0003_test/project_page',
-            'PDOStatus': 'PM team (Relatedness checks)',
+            'PDOStatus': 'Methods (Loading)',
             'PDOName': 'RGP_WGS_12',
         }}]})
         update_samples_request = responses.calls[4].request