SOM

Getting started

Very basic tutorial on 2D data using the test set in test directory:

http://nbviewer.ipython.org/gist/bougui505/9952997
Tutorial to cluster a trajectory in dcd format:

http://nbviewer.ipython.org/gist/bougui505/9955459

Name		Name	Last commit message	Last commit date
Latest commit History 308 Commits
application		application
minSOM		minSOM
test		test
.gitignore		.gitignore
GSOM.py		GSOM.py
IO.py		IO.py
LICENSE		LICENSE
PCA.py		PCA.py
README.rst		README.rst
ROCSOM.py		ROCSOM.py
SOM.conf		SOM.conf
SOM.py		SOM.py
SOM2.py		SOM2.py
SOMTools.py		SOMTools.py
SOManalysis.ipynb		SOManalysis.ipynb
SOMclust.py		SOMclust.py
SOMgraph.py		SOMgraph.py
coVar2Correlation.py		coVar2Correlation.py
dcdReader.py		dcdReader.py
matriceManipulation.py		matriceManipulation.py
mover.py		mover.py
parallelSOM.py		parallelSOM.py
priodict.py		priodict.py
progressbar.py		progressbar.py
progressbar_notebook.py		progressbar_notebook.py
protocol.py		protocol.py
somAnalysis.py		somAnalysis.py