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v0.7.0 inspect added -- fixed readme and cargo versioning
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bluenote-1577 committed Nov 6, 2024
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61 changes: 5 additions & 56 deletions Cargo.lock

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2 changes: 1 addition & 1 deletion Cargo.toml
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@@ -1,6 +1,6 @@
[package]
name = "sylph"
version = "0.6.1"
version = "0.7.0"
edition = "2021"
license = "MIT OR Apache-2.0"

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8 changes: 4 additions & 4 deletions README.md
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Expand Up @@ -49,7 +49,7 @@ sylph profile gtdb-r220-c200-dbv1.syldb -1 *_1.fastq.gz -2 *_2.fastq.gz -t (thre
sylph profile gtdb-r220-c200-dbv1.syldb *.fastq -t (threads) > profiling.tsv
```

## Install (current version v0.6.1)
## Install

#### Option 1: conda install
[![Anaconda-Server Badge](https://anaconda.org/bioconda/sylph/badges/version.svg)](https://anaconda.org/bioconda/sylph)
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# If default rust install directory is ~/.cargo
cargo install --path . --root ~/.cargo
sylph query test_files/*
sylph profile test_files/*
```
#### Option 3: Pre-built x86-64 linux statically compiled executable

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## Changelog

#### Version v0.6.1 - 2024-04-29.
#### Version v0.7.0 - 2024-11-06.

* Made unknown estimation (-u) more robust for low-depth short-read sequencing.
* Added the `inspect` option to inspect `.syldb/.sylsp` files.

See the [CHANGELOG](https://github.com/bluenote-1577/sylph/blob/main/CHANGELOG.md) for complete details.

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