new dcHiC environment file

ay-lab · Oct 29, 2021 · e40d72c · e40d72c
1 parent 4c90ec4
commit e40d72c
Showing 1 changed file with 34 additions and 0 deletions.
diff --git a/dchic.yml b/dchic.yml
@@ -0,0 +1,34 @@
+name: dchic
+channels:
+  - bioconda
+  - conda-forge
+  - r
+  - defaults
+dependencies:
+  - bedtools
+  - cooler
+  - bioconductor-limma
+  - bioconductor-ihw
+  - matplotlib
+  - numpy
+  - scikit-learn
+  - scipy
+  - sortedcontainers
+  - r-bigreadr
+  - r-bigstatsr
+  - r-depmixs4
+  - r-hashmap
+  - r-networkd3
+  - r-optparse
+  - r-rcpp
+  - r-rjson
+  - r-robust
+  - r-r.utils
+  - r-data.table
+  - python=3.7
+  - pysam
+  - pip
+  - requests
+  - pip:
+    - igv-reports
+