automl-edu · dwoiwode · Nov 18, 2021 · Nov 18, 2021
diff --git a/.github/actions/merge-pdftk/Dockerfile b/.github/actions/merge-pdftk/Dockerfile
@@ -0,0 +1,11 @@
+FROM ubuntu:latest
+
+# Installing packages
+# hadolint ignore=DL3018
+RUN apt update && \
+    apt install pdftk -y
+
+# https://docs.github.com/en/actions/creating-actions/dockerfile-support-for-github-actions#entrypoint
+COPY entrypoint.sh /entrypoint.sh
+RUN chmod +x entrypoint.sh
+ENTRYPOINT [ "/entrypoint.sh" ]
diff --git a/.github/actions/merge-pdftk/Readme.md b/.github/actions/merge-pdftk/Readme.md
@@ -0,0 +1,14 @@
+# `pdftk` GitHub Action
+
+This action merges pdfs with `pdftk`.
+
+## Inputs
+
+- `input-pattern` (required): name of files that should be merged
+- `output-file` (required): name of output
+
+<!-- ## Example usage
+
+uses: actions/hello-world-docker-action@v1
+with:
+  input-file: 'my_file.tex' -->
diff --git a/.github/actions/merge-pdftk/action.yml b/.github/actions/merge-pdftk/action.yml
@@ -0,0 +1,20 @@
+# Action metadata file:
+# https://docs.github.com/en/actions/creating-actions/creating-a-docker-container-action#creating-an-action-metadata-file
+
+name: 'pdftk GitHub Action'
+description: 'Runs pdftk to merge pdf-files'
+inputs:
+  input-pattern:
+    description: 'Pattern for input files'
+    required: true
+  output-name:
+    description: 'Name of output file'
+    required: false
+    default: 'merged.pdf'
+
+runs:
+  using: 'docker'
+  image: 'Dockerfile'
+  args:
+    - ${{ inputs.input-pattern }}
+    - ${{ inputs.output-name }}
diff --git a/.github/actions/merge-pdftk/entrypoint.sh b/.github/actions/merge-pdftk/entrypoint.sh
@@ -0,0 +1,6 @@
+#!/bin/sh
+
+# Recommended entrypoint script:
+# https://docs.github.com/en/actions/creating-actions/dockerfile-support-for-github-actions#example-entrypointsh-file
+
+sh -c "pdftk $1 cat output $2"
diff --git a/.github/actions/xelatex-week/Dockerfile b/.github/actions/xelatex-week/Dockerfile
@@ -0,0 +1,31 @@
+# Alpine Docker image version
+ARG ALPINE_VERSION="20201218"
+
+FROM alpine:${ALPINE_VERSION}
+
+# Installing packages
+# hadolint ignore=DL3018
+RUN apk update && \
+    apk add --no-cache \
+        texlive-full && \
+    rm -rf /var/cache/apk/
+
+# No 'xelatex' user
+#
+# https://docs.github.com/en/actions/creating-actions/dockerfile-support-for-github-actions#user
+#
+# RUN addgroup -S xelatex && adduser -S -G xelatex xelatex
+# USER xelatex
+
+# Not dedicated project directory
+#
+# https://docs.github.com/en/actions/creating-actions/dockerfile-support-for-github-actions#workdir
+#
+# WORKDIR /home/xelatex/project
+
+# Entrypoint script
+#
+# https://docs.github.com/en/actions/creating-actions/dockerfile-support-for-github-actions#entrypoint
+COPY entrypoint.sh /entrypoint.sh
+RUN chmod +x entrypoint.sh
+ENTRYPOINT [ "/entrypoint.sh" ]
diff --git a/.github/actions/xelatex-week/Readme.md b/.github/actions/xelatex-week/Readme.md
@@ -0,0 +1,19 @@
+# `xelatex` GitHub Action
+
+> Taken and extended from https://github.com/marcomicera/xelatex-action
+
+This action runs xelatex on a `.tex` file.
+
+## Inputs
+
+- `input-file` (required): name of the file to be compiled with `xelatex`.
+
+<!-- ## Outputs
+
+None. -->
+
+<!-- ## Example usage
+
+uses: actions/hello-world-docker-action@v1
+with:
+  input-file: 'my_file.tex' -->
diff --git a/.github/actions/xelatex-week/action.yml b/.github/actions/xelatex-week/action.yml
@@ -0,0 +1,20 @@
+# Action metadata file:
+# https://docs.github.com/en/actions/creating-actions/creating-a-docker-container-action#creating-an-action-metadata-file
+
+name: 'xelatex Lecture week'
+description: 'Runs xelatex on each .tex in a given folder'
+inputs:
+  folder:
+    description: 'Used folder'
+    required: true
+  mode:
+    description: 'Compiling mode. Can be "handout" or non handout'
+    required: false
+    default: 'animation'
+
+runs:
+  using: 'docker'
+  image: 'Dockerfile'
+  args:
+    - ${{ inputs.folder }}
+    - ${{ inputs.mode }}
diff --git a/.github/actions/xelatex-week/entrypoint.sh b/.github/actions/xelatex-week/entrypoint.sh
@@ -0,0 +1,11 @@
+#!/bin/sh
+
+# Recommended entrypoint script:
+# https://docs.github.com/en/actions/creating-actions/dockerfile-support-for-github-actions#example-entrypointsh-file
+
+cd $1
+sh -c "mkdir $2";
+for f in *.tex ; do
+  sh -c "xelatex -interaction=nonstopmode -jobname=${f%.*} \"\def\is$2{} \input{$f}\"" ;
+  sh -c "mv ${f%.*}.pdf ${2}/${f%.*}.pdf";
+done
diff --git a/.github/workflows/compile-all-on-push.yml b/.github/workflows/compile-all-on-push.yml
@@ -0,0 +1,85 @@
+name: Compile all
+
+on: push
+
+jobs:
+  compile:
+    name: Compile
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        week: [
+            "w01_big_picture",
+            "w02_evaluation",
+            "w03_algorithm_selection",
+            "w04_hpo_basics",
+            "w05_gps",
+            "w06_hpo_bo",
+            "w07_hpo_speedup",
+            "w08_hpo_multicrit",
+            "w09_nas",
+            "w10_meta_learning",
+            "w11_l2l_hpo_control",
+            "w12_analysis",
+            "w13_beyond_automl",
+            "w14_practical_considerations",
+            "w15_wrap_up"
+          ]
+        mode: [
+                "animation",
+                "handout",
+        ]
+    steps:
+      - uses: actions/checkout@v2
+      - name: compile week ${{ matrix.week }} with xelatex
+        uses: ./.github/actions/xelatex-week
+        with:
+          folder: ${{ matrix.week }}
+          mode: ${{ matrix.mode }}
+      - uses: actions/upload-artifact@v2
+        with:
+          name: Slides ${{ matrix.week }} (${{ matrix.mode }})
+          path: ${{ matrix.week }}/${{ matrix.mode }}/*.pdf
+  merge:
+    name: Merge slides
+    needs: compile
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        week: [
+            "w01_big_picture",
+            "w02_evaluation",
+            "w03_algorithm_selection",
+            "w04_hpo_basics",
+            "w05_gps",
+            "w06_hpo_bo",
+            "w07_hpo_speedup",
+            "w08_hpo_multicrit",
+            "w09_nas",
+            "w10_meta_learning",
+            "w11_l2l_hpo_control",
+            "w12_analysis",
+            "w13_beyond_automl",
+            "w14_practical_considerations",
+            "w15_wrap_up"
+          ]
+    steps:
+      - uses: actions/checkout@v2
+      - uses: actions/download-artifact@v2
+        with:
+          name: Slides ${{ matrix.week }} (handout)
+          path: ${{ matrix.week }}/
+      - name: Prepare output folder
+        run: sh -c "[[ -d slides ]] || mkdir slides"
+      - name: Merge slides for week ${{ matrix.week }} with pdftk
+        uses: ./.github/actions/merge-pdftk
+        with:
+          input-pattern: ${{ matrix.week }}/t*.pdf
+          output-name: slides/${{ matrix.week }}.pdf
+      - uses: actions/upload-artifact@v2
+        with:
+          name: Merged slides
+          path: slides/*.pdf
+
diff --git a/.gitignore b/.gitignore
@@ -10,5 +10,3 @@
 /tmp
 /.texlipse
 /.project
-/w06_hpo_bo/
-/w09_nas/
diff --git a/slides/Hannover_Freiburg_Settings_2021.pdf → misc/Hannover_Freiburg_Settings_2021.pdf b/slides/Hannover_Freiburg_Settings_2021.pdf → misc/Hannover_Freiburg_Settings_2021.pdf
diff --git a/slides/link_to_PDF_with_all_slides.txt b/slides/link_to_PDF_with_all_slides.txt
diff --git a/slides/w01_big_picture.pdf b/slides/w01_big_picture.pdf
diff --git a/slides/w02_evaluation.pdf b/slides/w02_evaluation.pdf
diff --git a/slides/w03_algorithm_selection.pdf b/slides/w03_algorithm_selection.pdf
diff --git a/slides/w04_hpo_basics.pdf b/slides/w04_hpo_basics.pdf
diff --git a/slides/w05_gps.pdf b/slides/w05_gps.pdf
diff --git a/slides/w06_hpo_bo.pdf b/slides/w06_hpo_bo.pdf
diff --git a/slides/w07_hpo_speedup.pdf b/slides/w07_hpo_speedup.pdf
diff --git a/slides/w08_hpo_multicrit.pdf b/slides/w08_hpo_multicrit.pdf
diff --git a/slides/w09_nas.pdf b/slides/w09_nas.pdf
diff --git a/slides/w11_l2l_hpo_control.pdf b/slides/w11_l2l_hpo_control.pdf
diff --git a/slides/w12_analysis.pdf b/slides/w12_analysis.pdf
diff --git a/slides/w13_beyond_automl.pdf b/slides/w13_beyond_automl.pdf
diff --git a/slides/w15_wrap_up.pdf b/slides/w15_wrap_up.pdf
diff --git a/w01_big_picture/t01_big_picture.pdf b/w01_big_picture/t01_big_picture.pdf
diff --git a/w01_big_picture/t02_the_team.pdf b/w01_big_picture/t02_the_team.pdf
diff --git a/w01_big_picture/t035_connections.pdf b/w01_big_picture/t035_connections.pdf
diff --git a/w01_big_picture/t03_problems.pdf b/w01_big_picture/t03_problems.pdf
diff --git a/w01_big_picture/t04_risks.pdf b/w01_big_picture/t04_risks.pdf
diff --git a/w02_evaluation/t01_big_picture.pdf b/w02_evaluation/t01_big_picture.pdf
diff --git a/w02_evaluation/t02_evaluation.pdf b/w02_evaluation/t02_evaluation.pdf
diff --git a/w02_evaluation/t03_benchmarking.pdf b/w02_evaluation/t03_benchmarking.pdf
diff --git a/w02_evaluation/t03_stat_tests.pdf b/w02_evaluation/t03_stat_tests.pdf
diff --git a/w02_evaluation/t04_benchmarking.pdf b/w02_evaluation/t04_benchmarking.pdf
diff --git a/w02_evaluation/t04_nested_evaluation.pdf b/w02_evaluation/t04_nested_evaluation.pdf
diff --git a/w02_evaluation/t05_nested_evaluation.pdf b/w02_evaluation/t05_nested_evaluation.pdf
diff --git a/w02_evaluation/t06_over_time.pdf b/w02_evaluation/t06_over_time.pdf
diff --git a/w03_algorithm_selection/t01_big_picture.pdf b/w03_algorithm_selection/t01_big_picture.pdf
diff --git a/w03_algorithm_selection/t02_portfolios_as.pdf b/w03_algorithm_selection/t02_portfolios_as.pdf
diff --git a/w03_algorithm_selection/t03_features.pdf b/w03_algorithm_selection/t03_features.pdf
diff --git a/w03_algorithm_selection/t04_performance_models.pdf b/w03_algorithm_selection/t04_performance_models.pdf
diff --git a/w03_algorithm_selection/t05_comb.pdf b/w03_algorithm_selection/t05_comb.pdf
diff --git a/w04_hpo_basics/t01_intro.pdf b/w04_hpo_basics/t01_intro.pdf
diff --git a/w04_hpo_basics/t02_rsgs.pdf b/w04_hpo_basics/t02_rsgs.pdf
diff --git a/w04_hpo_basics/t03_ea.pdf b/w04_hpo_basics/t03_ea.pdf
diff --git a/w04_hpo_basics/t04_practical.pdf b/w04_hpo_basics/t04_practical.pdf
diff --git a/w05_gps/t01_bayes_lm.pdf b/w05_gps/t01_bayes_lm.pdf
diff --git a/w05_gps/t02_basic.pdf b/w05_gps/t02_basic.pdf
diff --git a/w05_gps/t03_covariance.pdf b/w05_gps/t03_covariance.pdf
diff --git a/w05_gps/t04_prediction.pdf b/w05_gps/t04_prediction.pdf
diff --git a/w05_gps/t05_training.pdf b/w05_gps/t05_training.pdf
diff --git a/w05_gps/t06_mean.pdf b/w05_gps/t06_mean.pdf
diff --git a/w05_gps/t07_covariance_adv.pdf b/w05_gps/t07_covariance_adv.pdf
diff --git a/w05_gps/t08_additional.pdf b/w05_gps/t08_additional.pdf
diff --git a/w05_gps/t09_classification.pdf b/w05_gps/t09_classification.pdf
diff --git a/w06_hpo_bo/t01_introduction.pdf b/w06_hpo_bo/t01_introduction.pdf
diff --git a/w06_hpo_bo/t02_acq_functions_1.pdf b/w06_hpo_bo/t02_acq_functions_1.pdf
diff --git a/w06_hpo_bo/t03_acq_functions_2.pdf b/w06_hpo_bo/t03_acq_functions_2.pdf
diff --git a/w06_hpo_bo/t04_surrogate_models.pdf b/w06_hpo_bo/t04_surrogate_models.pdf
diff --git a/w06_hpo_bo/t05_extensions.pdf b/w06_hpo_bo/t05_extensions.pdf
diff --git a/w06_hpo_bo/t06_tpe.pdf b/w06_hpo_bo/t06_tpe.pdf
diff --git a/w06_hpo_bo/t07_success_stories.pdf b/w06_hpo_bo/t07_success_stories.pdf
diff --git a/w06_hpo_bo/t99_bibliography.pdf b/w06_hpo_bo/t99_bibliography.pdf
diff --git a/w07_hpo_speedup/t01_intro.pdf b/w07_hpo_speedup/t01_intro.pdf
diff --git a/w07_hpo_speedup/t02_meta_learning.pdf b/w07_hpo_speedup/t02_meta_learning.pdf
diff --git a/w07_hpo_speedup/t03_mf_overview.pdf b/w07_hpo_speedup/t03_mf_overview.pdf
diff --git a/w07_hpo_speedup/t04_hyperband.pdf b/w07_hpo_speedup/t04_hyperband.pdf
diff --git a/w07_hpo_speedup/t05_bohb.pdf b/w07_hpo_speedup/t05_bohb.pdf
diff --git a/w07_hpo_speedup/t06_mf_bo.pdf b/w07_hpo_speedup/t06_mf_bo.pdf
diff --git a/w07_hpo_speedup/t07_learning_curve.pdf b/w07_hpo_speedup/t07_learning_curve.pdf
diff --git a/w07_hpo_speedup/t08_success_stories.pdf b/w07_hpo_speedup/t08_success_stories.pdf
diff --git a/w07_hpo_speedup/t99_bibliography.pdf b/w07_hpo_speedup/t99_bibliography.pdf
diff --git a/w08_hpo_multicrit/t01_introduction.pdf b/w08_hpo_multicrit/t01_introduction.pdf
diff --git a/w08_hpo_multicrit/t02_evolutionary_algos.pdf b/w08_hpo_multicrit/t02_evolutionary_algos.pdf
diff --git a/w08_hpo_multicrit/t03_bo.pdf b/w08_hpo_multicrit/t03_bo.pdf
diff --git a/w08_hpo_multicrit/t04_practical.pdf b/w08_hpo_multicrit/t04_practical.pdf
diff --git a/w09_nas/t01_big_picture.pdf b/w09_nas/t01_big_picture.pdf
diff --git a/w09_nas/t02_search_spaces.pdf b/w09_nas/t02_search_spaces.pdf
diff --git a/w09_nas/t03_blackbox_nas_opt.pdf b/w09_nas/t03_blackbox_nas_opt.pdf
diff --git a/w09_nas/t04_speedup_techniques.pdf b/w09_nas/t04_speedup_techniques.pdf
diff --git a/w09_nas/t05_best_practices.pdf b/w09_nas/t05_best_practices.pdf
diff --git a/w09_nas/t07_oneshot_nas.pdf b/w09_nas/t07_oneshot_nas.pdf
diff --git a/w09_nas/t08_darts.pdf b/w09_nas/t08_darts.pdf
diff --git a/w09_nas/t09_NASlib.pdf b/w09_nas/t09_NASlib.pdf
diff --git a/w09_nas/t10_practical_recommendations.pdf b/w09_nas/t10_practical_recommendations.pdf
diff --git a/w09_nas/t99_bibliography.pdf b/w09_nas/t99_bibliography.pdf
diff --git a/w11_l2l_hpo_control/t01_big_picture.pdf b/w11_l2l_hpo_control/t01_big_picture.pdf
diff --git a/w11_l2l_hpo_control/t02_control.pdf b/w11_l2l_hpo_control/t02_control.pdf
diff --git a/w11_l2l_hpo_control/t03_control_learning_rates.pdf b/w11_l2l_hpo_control/t03_control_learning_rates.pdf
diff --git a/w11_l2l_hpo_control/t04_pbt.pdf b/w11_l2l_hpo_control/t04_pbt.pdf
diff --git a/w11_l2l_hpo_control/t05_l2l_supervised.pdf b/w11_l2l_hpo_control/t05_l2l_supervised.pdf
diff --git a/w11_l2l_hpo_control/t06_l2l_rl.pdf b/w11_l2l_hpo_control/t06_l2l_rl.pdf
diff --git a/w12_analysis/t01_big_picture.pdf b/w12_analysis/t01_big_picture.pdf
diff --git a/w12_analysis/t02_automl_process.pdf b/w12_analysis/t02_automl_process.pdf
diff --git a/w12_analysis/t03_local_importance.pdf b/w12_analysis/t03_local_importance.pdf
diff --git a/w12_analysis/t04_global_importance.pdf b/w12_analysis/t04_global_importance.pdf
diff --git a/w13_beyond_automl/t01_big_picture.pdf b/w13_beyond_automl/t01_big_picture.pdf
diff --git a/w13_beyond_automl/t02_racing.pdf b/w13_beyond_automl/t02_racing.pdf
diff --git a/w13_beyond_automl/t03_capping.pdf b/w13_beyond_automl/t03_capping.pdf
diff --git a/w13_beyond_automl/t04_procastination.pdf b/w13_beyond_automl/t04_procastination.pdf
diff --git a/w13_beyond_automl/t05_practice.pdf b/w13_beyond_automl/t05_practice.pdf
diff --git a/w13_beyond_automl/t06_piac.pdf b/w13_beyond_automl/t06_piac.pdf
diff --git a/...atical_considerations/t01_big_picture.tex → ...ctical_considerations/t01_big_picture.tex b/...atical_considerations/t01_big_picture.tex → ...ctical_considerations/t01_big_picture.tex
diff --git a/w15_wrap_up/t01_intro.pdf b/w15_wrap_up/t01_intro.pdf
diff --git a/w15_wrap_up/t02_prepro.pdf b/w15_wrap_up/t02_prepro.pdf
diff --git a/w15_wrap_up/t03_practical_problems.pdf b/w15_wrap_up/t03_practical_problems.pdf
diff --git a/w15_wrap_up/t04_pipelines.pdf b/w15_wrap_up/t04_pipelines.pdf