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<code>fold</code> does not produce energy of no stems if none are selected

bugSomething isn't workingSomething isn't working

Status: Open.

#92 In andrewsb8/quvax;

· andrewsb8 opened on Jan 13, 2025

Cotranscriptional folding fails without initial states

bugSomething isn't workingSomething isn't working

Status: Open.

#72 In andrewsb8/quvax;

· andrewsb8 opened on Sep 13, 2024

argparse may conflict between options with overlapping strings

upstreamfrom dependencyfrom dependency

Status: Open.

#54 In andrewsb8/quvax;

· andrewsb8 opened on Jul 17, 2024

<code>TFDE</code> memory leak

upstreamfrom dependencyfrom dependency

Status: Open.

#45 In andrewsb8/quvax;

· andrewsb8 opened on Jun 17, 2024

Too many upstream warnings

enhancementNew feature or requestNew feature or request

Status: Open.

#34 In andrewsb8/quvax;

· andrewsb8 opened on Apr 30, 2024

Analysis modules will also need some type of iterator if the output of <code>design.py</code> is too large to load in memory

enhancementNew feature or requestNew feature or request

Status: Open.

#26 In andrewsb8/quvax;

· andrewsb8 opened on Mar 14, 2024

<code>test_TfDiffEv_OneIteration</code> fails sometimes

bugSomething isn't workingSomething isn't working

Status: Open.

#19 In andrewsb8/quvax;

· andrewsb8 opened on Jan 9, 2024

Treatment of Pseudoknots

discussion

Status: Open.

#12 In andrewsb8/quvax;

· andrewsb8 opened on Nov 6, 2023