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Issues list

Missing resource cleanup in runWarpLDAModels
#83 by villadswin was closed Apr 5, 2024
Running Cistopic
#78 by Sayyam-Shah was closed Sep 15, 2022
1
add cisTopic output to Seurat object?
#77 by klgoss was closed Sep 1, 2022
1
Ununsed Arguement error in cisTopic/TcisTarget
#74 by AAA-3 was closed May 31, 2022
1
How can I run cisTopic in R 4.0
#73 by Paul-YPH was closed May 28, 2022
2
LDA run with Python and LogLikelihhod
#72 by fvalle1 was closed May 13, 2022
1
tSNE Clustering Thresholds
#71 by AAA-3 was closed May 13, 2022
1
Tutorial Dataset files
#70 by AAA-3 was closed May 4, 2022
1
Installation issue
#69 by andrewjkwok was closed May 20, 2022
2
input from fragments.tsv.gz?
#68 by JBreunig was closed May 4, 2022
1
createcisTopicObject and genomic coordinates incompatibility error
#67 by simozhou was closed May 4, 2022
3
annotateRegions with own dataset
#66 by sinkahak was closed May 4, 2022
1
possibility to use BAM files from bulk ChIP
#65 by abedkurdi was closed May 4, 2022
1
installation issue with ubuntu 20.04
#64 by vjbaskar was closed May 4, 2022
3
Question about createcisTopicObject
#63 by kridsadakorn was closed Feb 18, 2021
1
maximal median size of population peaks
#62 by robinweide was closed May 4, 2022
1
cistopic object to archR
#61 by ytang0831 was closed May 4, 2022
1
Rsubread should be listed as a required package
#60 by kridsadakorn was closed May 4, 2022
2
The function runModels is missing
#59 by kridsadakorn was closed May 4, 2022
2
license
#58 by abotzki was closed Sep 8, 2020
2
Is aggregation of dataset required for cisTopic
#57 by sylestiel was closed Sep 8, 2020
2
Column 4 ['rep..TF_lowConf...length.peaks..'] of item 2 is missing in item 1.
#56 by sylestiel was closed May 4, 2022
3
Error in metadataFeather(path)
#55 by sylestiel was closed Aug 27, 2020
2
How to obtain Signatures for our purposes
#54 by sylestiel was closed Aug 25, 2020
Integration using Harmony as described in Drosophila eye-antennal disc preprint
#53 by liaojinyue was closed May 20, 2020
4
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