Soot and petsc fixes #1114

Job	Run time
test-matrix (ARM64, -arm64, gcc, g++, -gcc, 0, arch-ablate-opt)	30m 52s
test-matrix (ARM64, -arm64, gcc, g++, -gcc, 0, arch-ablate-opt, enabled_tf)	48m 5s
test-matrix (ARM64, -arm64, gcc, g++, -gcc, 1, -index64, arch-ablate-opt)	48m 42s
test-matrix (ARM64, -arm64, gcc, g++, -gcc, 1, -index64, arch-ablate-opt, enabled_tf)	33m 45s
test-matrix (ARM64, -arm64, clang, clang++, -clang, 0, arch-ablate-opt)	39m 26s
test-matrix (ARM64, -arm64, clang, clang++, -clang, 0, arch-ablate-opt, enabled_tf)	40m 39s
test-matrix (ARM64, -arm64, clang, clang++, -clang, 1, -index64, arch-ablate-opt)	40m 9s
test-matrix (ARM64, -arm64, clang, clang++, -clang, 1, -index64, arch-ablate-opt, enabled_tf)	39m 31s
test-matrix (ubuntu-latest, -amd64, gcc, g++, -gcc, 0, arch-ablate-opt)	33m 1s
test-matrix (ubuntu-latest, -amd64, gcc, g++, -gcc, 0, arch-ablate-opt, enabled_tf)	33m 5s
test-matrix (ubuntu-latest, -amd64, gcc, g++, -gcc, 1, -index64, arch-ablate-opt)	34m 3s
test-matrix (ubuntu-latest, -amd64, gcc, g++, -gcc, 1, -index64, arch-ablate-opt, enabled_tf)	32m 52s
test-matrix (ubuntu-latest, -amd64, clang, clang++, -clang, 0, arch-ablate-opt)	30m 44s
test-matrix (ubuntu-latest, -amd64, clang, clang++, -clang, 0, arch-ablate-opt, enabled_tf)	31m 6s
test-matrix (ubuntu-latest, -amd64, clang, clang++, -clang, 1, -index64, arch-ablate-opt)	30m 26s
test-matrix (ubuntu-latest, -amd64, clang, clang++, -clang, 1, -index64, arch-ablate-opt, enabled...	30m 47s
test	1s
	9h 37m 14s

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