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template-mkdocs

Setup

  • Create new repository using this as a template

  • In the cloned repository: Settings -> Pages -> Build and deployment:

    • Source: Deploy from a branch
    • Branch: gh-pages
    • Folder: / (root)
  • Set up mkdocs locally

Using mamba:

mamba create -n mkdocs -c conda-forge mkdocs-material
mamba activate mkdocs
.
├── docs # all contents for pages here
│   ├── assets
│   │   └── usyd-logo.png
│   ├── extra.css # usyd styling
│   └── index.md # home page
├── .github # GH action to auto publish when pushed to main
│   └── workflows
│       └── mkdocs_deploy.yml
├── mkdocs.yml # config for extensions, contents/navbar, etc.
└── README.md

Usage

To preview changes in your browser:

# mamba activate mkdocs
mkdocs serve

All pushes to main will render the content and publish to github pages automatically.

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Materials for the 2026 delivery of the Customising nf-core Australian BioCommons workshop.

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