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Release v1.2.2

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@DonFreed DonFreed released this 02 May 06:53
· 119 commits to main since this release
v1.2.2
85770e8
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Learn about vigilant mode.

General Updates

  • Pipelines now execute in a deterministic order.
  • Add support for parsing bundle files.

DNAscope

  • Add a new argument --skip_metrics to skip all metrics collection and multiqc.

DNAscope Hybrid

  • The pipeline now parses the bundle_info.json file in the hybrid model bundle to determine platform-specific arguments, removing the --longread_tech argument.
  • Add a new argument --skip_metrics to skip all short-read metrics, multiqc, and mosdepth.
  • Add a new argument --rgsm that can be used to set the SM tag in the input file readgroups.
Assets 3
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