MSCI-Warsaw: Add missing database mappings - #57
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… and bespoke variables - Add missing columns: immunotherapy, radiotherapy, surgery, chemotherapy - Add missing columns: year_of_initial_diagnosis, educational_level, occupational, biological_sex - Update bespoke questions (q2, q3, q5, q85) to include AO05 in unable_to_answer - Update eortc_qlq_aya questions (q19, q20, q21) to include N/A in not_applicable Note: Polish terms (Sporo, Tak, Wyzsze, srednie) require clarification from AnnaSikoraKoperska (see issue #56) Closes #56 Co-authored-by: JHogenboom <JHogenboom@users.noreply.github.com>
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August 24, 2026 13:25
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Summary
Add missing MSCI-Warsaw database mappings for treatment, demographic, and bespoke variables based on data analysis.
Changes Made
New Columns Added
immunotherapy,radiotherapy,surgery,chemotherapy- mapped to yes/noyear_of_initial_diagnosis- no localMappings (values are already in correct format)educational_level- mapped Polish terms (Wyzsze → ISCED-5, srednie → ISCED-3)occupational- mapped Polish terms (Tak → working_full_time, unemployed → unemployed)biological_sex- mapped to male/female with M/K and AO01/AO02 codesExisting Columns Updated
AO05tounable_to_answerfor q2, q3, q5, q85N/Atonot_applicablefor q19, q20, q21Notes
Verification
Closes #56