TheChristie-Manchester: Add missing T-stage mappings - #51
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Add the following T-stage values to pathological_t_stage localMappings: - T1a, T1b (to stage 1) - T2a (to stage 2) - T3a (to stage 3) - Tis (to stage 0) - 0, 1, 2, 3, 4, x (numeric and x values) These values were found in the Manchester data analysis but were not previously mapped in the schema. Co-authored-by: JHogenboom <JHogenboom@users.noreply.github.com>
JHogenboom
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T stage is pulled from a combined table. It will come primarily from path_stage, if path_stage does not exist then clinical_stage is used. Given this, it will be a combination of clinical and pathological staging. |
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@CharlieJHeaven Thanks for clearing that up! |
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Yes that sounds reasonable to me. |
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These T-stage values were identified in the Manchester data analysis but were not previously mapped in the schema. All values are added to the existing pathological_t_stage localMappings since there is only one T-stage column in the data.
Note: The user will verify with the hospital whether this should be labeled as clinical_t_stage or pathological_t_stage.