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RaniCodes/README.md

πŸ‘©β€πŸ’» Hi, I'm Vaishnavi Salunke!

Aspiring Clinical Bioinformatician β€’ Science Communicator β€’ Data-driven Research in India

Portfolio LinkedIn Email


πŸ’« About Me

πŸ”­ Currently Working On
Cancer genomics projects analyzing WGS and RNA-seq data across multiple cancer types including prostate cancer hypoxia, cervical cancer, and triple-negative breast cancer

🌱 Currently Learning
Bulk RNA-seq analysis, advanced differential expression, and clinical bioinformatics workflows

πŸ‘― Looking to Collaborate On
Cancer genomics research, clinical bioinformatics projects, and reproducible bioinformatics pipeline development

πŸ’¬ Ask Me About
RNA-seq preprocessing, quality control with FastQC/fastp, Galaxy workflows, bioinformatics for beginners, and science communication


πŸŽ“ Education

  • M.Sc. Bioinformatics, Savitribai Phule Pune University (August 2025-27)
  • B.Sc. Zoology, Sir Parashurambhau College, Pune (CGPA 9.41 - Top Grade)

🧬 Interests

  • Clinical Bioinformatics | Genomics | Clinical Research
  • Bioethics | Data-driven Solutions in Healthcare | Science Communication

πŸ“ Experience & Certifications

  • Content Writing Intern, The Vigyan Chronicles
  • Proofreader & Contributor, Calyx Magazine
  • NASA GeneLab GL4U (bioinformatics, R, Unix, Jupyter)
  • WHO Research Ethics Certified
  • GAT-B 2025 (AIR 235 Qualified), CUET-PG Qualified
  • Academic Experience: Pondicherry University

πŸ† Achievements

Academic Excellence

  • B.Sc. Zoology Top Grade - CGPA 9.41, Sir Parashurambhau College, Pune
  • GAT-B 2025 - All India Rank 235 | General Category Rank 64 (among qualified candidates nationwide)
  • Multiple Top University Admissions – Secured offers from JNU (MSc Molecular Medicine), University of Hyderabad (HCU), SPPU, and Pondicherry University (MSc Bioinformatics & Biotechnology programs), and many top private universities as well
  • DBT-Funded Scholar - Selected for prestigious Department of Biotechnology scholarship

Research & Technical

  • NASA GeneLab GL4U Certified - Completed advanced bioinformatics training (R, Unix, Jupyter)
  • Bulk RNA-seq Pipeline - Built end-to-end bulk RNA-seq workflow for prostate cancer hypoxia analysis
  • Cancer Genomics Collaboration - Active contributor analyzing WGS and RNA-seq data across multiple cancer types
  • WHO Research Ethics Certified - Completed international certification in research ethics

Awards & Recognition

  • 1st Prize, Science Exhibit - Circadian Rhythm Model presentation
  • Content Writing Intern - The Vigyan Chronicles (science communication)
  • Proofreader & Contributor - Calyx Magazine (SP College's first research magazine, scientific editorial work)

πŸ’» Tech Stack

python r bash mysql linux ubuntu git github jupyter galaxy multiqc

### Languages & Programming

Python R Bash MySQL Markdown

Development Environment & Version Control

Linux Ubuntu Git GitHub Jupyter RStudio

Quality Control & Preprocessing

FastQC MultiQC fastp Trimmomatic

Alignment & Quantification

HISAT2 SAMtools featureCounts

Differential Expression & Analysis

DESeq2 Bioconductor

Data Retrieval & Workflow Platforms

SRA Toolkit Galaxy


🀝 Let's Collaborate!

I'm eager to connect with students, professionals, and researchers in clinical bioinformatics, genomics, or healthcare data science. Let's work together to make research impactful and accessible.

"Driven by curiosity, ethics, and the excitement of bridging biology with data for better healthcare in India."


Pinned Loading

  1. Bulk-RNASeq-prostate-cancer-hypoxia-Pipeline Bulk-RNASeq-prostate-cancer-hypoxia-Pipeline Public

    HTML 2

  2. Clinical-Bioinformatics-Journey-2025-27 Clinical-Bioinformatics-Journey-2025-27 Public

    My 2-year journey from MSc student to Clinical Bioinformatician in India

    Jupyter Notebook 2