Add Aerosol and Cloud Chemistry Options

[mattldawson]

This PR adds MIAM to the MUSICA library, and makes its components available via the Python API.

Three new tutorial chapters are included (DAE solvers, MIAM components, CAM cloud chemsitry)

This is in draft as dependency PRs are finalized and merged.

[codecov-commenter]

Codecov Report

❌ Patch coverage is 90.04425% with 45 lines in your changes missing coverage. Please review.
✅ Project coverage is 74.83%. Comparing base (c7e3663) to head (59b95bf).
⚠️ Report is 1 commits behind head on main.

Files with missing lines	Patch %	Lines
src/miam/miam_builder.cpp	88.08%	23 Missing ⚠️
python/musica/miam/model.py	86.66%	8 Missing ⚠️
python/musica/mechanism_configuration/species.py	78.94%	4 Missing ⚠️
src/micm/micm.cpp	63.63%	4 Missing ⚠️
src/micm/cpu_solver.cpp	89.28%	3 Missing ⚠️
src/micm/micm_c_interface.cpp	57.14%	3 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #842      +/-   ##
==========================================
+ Coverage   74.15%   74.83%   +0.68%     
==========================================
  Files         127      135       +8     
  Lines       10089    10536     +447     
==========================================
+ Hits         7481     7885     +404     
- Misses       2608     2651      +43     

Flag	Coverage Δ
cpp_fortran	66.72% <86.90%> (+1.01%)	⬆️
javascript	93.22% <ø> (ø)
python	79.92% <94.00%> (+0.76%)	⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:

• ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.
• 📦 JS Bundle Analysis: Save yourself from yourself by tracking and limiting bundle sizes in JS merges.

[K20shores]

@mattldawson how easy is it to update the liquid water content throughout a simulation?

[mattldawson]

@mattldawson how easy is it to update the liquid water content throughout a simulation?

Cloud liquid water content, in MICM/MIAM, would typically just be a condensed-species named water or H2O or something. It's just like any other solver variable, it will be adjusted based on processes that form or remove it. It could also be an algebraic variable that's calculated from a constraint. But, there's nothing special about it - it's just another condensed-phase species.