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New scripts from template repo #1

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38 changes: 19 additions & 19 deletions .github/scripts/update_doi.py
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Original file line number Diff line number Diff line change
Expand Up @@ -86,35 +86,35 @@
commit_message = "Update nci_iso.csv with DOI"
repo.update_file(csv_file_path, commit_message, updated_csv_content, file_content.sha)

# YAML
yaml = YAML(typ=['rt', 'string'])
yaml.preserve_quotes = True
yaml.indent(mapping=2, sequence=4, offset=2)
## YAML
#yaml = YAML(typ=['rt', 'string'])
#yaml.preserve_quotes = True
#yaml.indent(mapping=2, sequence=4, offset=2)

# Read existing file
yaml_file_path = ".website_material/index.md"
web_yaml_dict = read_yaml_with_header(yaml_file_path)
#yaml_file_path = ".website_material/index.md"
#web_yaml_dict = read_yaml_with_header(yaml_file_path)

# Path to key to update
#key_path = "dataset.doi"
#add doi to the top level only
key_path = "doi"
#key_path = "doi"
# Update value
navigate_and_assign(web_yaml_dict, key_path, doi)
key_path = "creditText"
#navigate_and_assign(web_yaml_dict, key_path, doi)
#key_path = "creditText"
# Update value
navigate_and_assign(web_yaml_dict, key_path, citation_str)
#navigate_and_assign(web_yaml_dict, key_path, citation_str)

# Use an in-memory text stream to hold the YAML content
stream = io.StringIO()
stream.write("---\n")
yaml.dump(web_yaml_dict, stream)
stream.write("---\n")
yaml_content_with_frontmatter = stream.getvalue()

file_content = repo.get_contents(yaml_file_path)
commit_message = "Update YAML file with DOI"
repo.update_file(yaml_file_path, commit_message, yaml_content_with_frontmatter, file_content.sha)
#stream = io.StringIO()
#stream.write("---\n")
#yaml.dump(web_yaml_dict, stream)
#stream.write("---\n")
#yaml_content_with_frontmatter = stream.getvalue()

#file_content = repo.get_contents(yaml_file_path)
#commit_message = "Update YAML file with DOI"
#repo.update_file(yaml_file_path, commit_message, yaml_content_with_frontmatter, file_content.sha)

# Print True to indicate success so that files may be copied to website repo
print(True)
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