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@MoMS-MMSB

MoMS-MMSB

Modeling bioMolecular Systems (MoMS)

This is the github page of the MoMS group. Modeling bioMolecular Systems (MoMS) is a research group at CNRS led by Luca Monticelli, with Cecil Hilpert as a main software engineer. We study the structure, dynamics, and interactions of biological macromolecules using bioinformatics and molecular simulations. We also develop our own tools, both in the area of bioinformatics and in molecular simulations. We share publicly most of our software tools via this GitHub page. Our ultimate goal is to better understand of the links between structure, interactions and, ultimately, biological functions at the molecular level.

Our main activities focus on biomembranes: structure, dynamics, and interactions. Biological membranes envelop and compartmentalize all living cells. Biomembranes are extremely dynamic entities at all levels – in fact the vast majority of them is liquid, in physiologically relevant states, which makes it very challenging to obtain structural information at high resolution with experimental techniques. We use molecular simulations at multiple levels, from quantum mechanics to all-atom and coarse-grained molecular dynamics simulations, to gain insight into membrane structure, dynamics, interactions, and transformations.

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  1. Martini3-Graphene Martini3-Graphene Public

    This repository contains the tools to build the Martini 3 version of graphene (structure and ITP files)

    Python

Repositories

Showing 10 of 10 repositories
  • Martini3-Graphene Public

    This repository contains the tools to build the Martini 3 version of graphene (structure and ITP files)

    MoMS-MMSB/Martini3-Graphene’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 12, 2025
  • Martini3-Fullerene Public

    It will have all the tools necessary for building the M3 version of Fullerene.

    MoMS-MMSB/Martini3-Fullerene’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Feb 7, 2025
  • .github Public
    MoMS-MMSB/.github’s past year of commit activity
    0 0 0 0 Updated Dec 16, 2024
  • protein-cross-sections Public

    various tools for calculating protein geometries across trajectories

    MoMS-MMSB/protein-cross-sections’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 11, 2024
  • MoMS-MMSB/buckle-bending-modulus’s past year of commit activity
    Python 0 GPL-2.0 0 0 0 Updated Nov 8, 2024
  • lipid_sorting Public

    Analyzing how lipids sort in tubules according to their intrinsic curvature

    MoMS-MMSB/lipid_sorting’s past year of commit activity
    Python 1 0 5 0 Updated Jul 23, 2024
  • MoMS-MMSB/How-to-build-peptides’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 5, 2024
  • g_ordercg Public archive
    MoMS-MMSB/g_ordercg’s past year of commit activity
    C 0 0 0 0 Updated Jun 5, 2024
  • g_thickness Public archive
    MoMS-MMSB/g_thickness’s past year of commit activity
    C 0 0 0 0 Updated Jun 5, 2024
  • g_mydensity Public
    MoMS-MMSB/g_mydensity’s past year of commit activity
    C 0 0 0 0 Updated Jun 5, 2024

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